| Protein: | SPCC794.08 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 798 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC794.08.
| Description | E-value | Query Range |
Subject Range |
|
|
497.0 | [0..6] | [495..272] |
|
|
494.0 | [0..6] | [495..155] |
|
|
486.0 | [0..6] | [495..12] |
|
|
485.0 | [0..6] | [495..56] |
|
|
484.0 | [0..6] | [495..31] |
|
Region A: Residues: [1-103] |
1 11 21 31 41 51
| | | | | |
1 MWLLFRSKHK KLVLRCFPSG KLGETEPNGS PLAYLSYYAA SNSSKLRKVA HFLGSRVRHS 60
61 YYHKRDNEVI IGLKICKTLV QKCRDNINVM ASEVVNMLLV ASS
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.953 | N/A | N/A | a.24.10 | Histidine-containing phosphotransfer domain, HPT domain |
|
Region A: Residues: [104-262] |
1 11 21 31 41 51
| | | | | |
1 SKNLEVLSAC VDCFATFCDN SGKGSPATFG NEFHSAFNNL VNSFFELSKG IDCVDPQQSK 60
61 MLGLKAFHAL TACKFAGTEG GMRYQPHFAI HCVLINSWSE SDQEKKSFID LVRSTAKSYK 120
121 PLPPSSTGVS LPEHDEAGDN IDVAIKKLCI RILFNIYTQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.875 | a.24.3 | Cytochromes |
|
Region A: Residues: [263-428] |
1 11 21 31 41 51
| | | | | |
1 TDPLFMAEST KSLIHFFAAK SDTPVNLEYI SVVLNQILDW TPVELRHSIF FCCLRCLSSS 60
61 RIVNSETNVM VPYMIYSILN SKNSISGLSV IDVLRDLGSH LINAVNSFDA DDQTWYNMCE 120
121 SPSEKLPRRL YLLLVCITCL TKHQYYDEEF ADVWREIDTL ANSETS
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [429-495] |
1 11 21 31 41 51
| | | | | |
1 SAIQMVALTA FHKLQNEKLN TKKESSAPLS LVTDFLLHSW PKSAERLHTS QSPFVRIKTA 60
61 EVFYEFL
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [496-701] |
1 11 21 31 41 51
| | | | | |
1 CFLRPSLINF DTILRKSAIT SFSVLWDFIY ETSWHIERWL KVFSVQSEFY ILKLIIQRLY 60
61 QLYGPVSVTA VLPAMYRGLR PFENDPPRCI AEAVTAYYII YIGENLKITT LQSSGRKWLD 120
121 SLSSSLPSSL LNRGSSTHSW EKLTNASTEE VMLPLDMVVN ELLEKSPKVF PEDSRLLFAE 180
181 QSRHPKYTDI IQKLKKPSRE KSFTSS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [702-798] |
1 11 21 31 41 51
| | | | | |
1 SEYSLPFISP ASDYQQNPLL HATKSLVSIH QQSQRGEMVS TLKQALSRPH TASTVVRSPS 60
61 EINLTRQTSN RVPLLDMLNL NRAMSPTPIQ SPPYVRT
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.827 | a.177.1 | Sigma2 domain of RNA polymerase sigma factors |
