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Protein Overview: SPBC24C6.08c

General Information:
Name(s) found: SPBC24C6.08c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • vesicle coat protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    vesicle coat [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: Golgi to plasma membrane transport [ISSLink to PubMed article]
    intracellular protein transport [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVVFALGHF CEAEGPSIIF CTQKLHRSTV SKFFEHPTSK RSIGVTENGN DSPEAFKNEL  60
   61 DNRNNADSQS LQSSTESLFK ADSEDYLCKK VSKGPESPRV NSFHNSYSRN QSPISRKSSC 120
  121 VTCSTVLPLE FSVPDVQPRL YTNSSTNPDV LYMSSQHPHT QQRYSTLKRL MVRCLSCEYS 180
  181 TLSEASDSMS NPLFFGDQDN GYVISQSFSL RDPSARGGLR RYAIIATCPN QLDLILRYSF 240
  241 ISEKFLHIVQ FLRISSFNTK NDYSSSRSKT TASSSNGTFA SPSFNISSLS GSSNIGTAPS 300
  301 YEISSSIGAN VSSLAHTQRL PSFSFLRRRD DIGEGRSLVD ITCWDGIFVG LHSSFSWILE 360
  361 VWDLLVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] deduced N/A No confident structure predictions are available.
    2 View Details [104..190] MSA 1.016992 View MSA. No confident structure predictions are available.
    3 View Details [191..276] deduced N/A No confident structure predictions are available.
    4 View Details [277..367] MSA 1.015993 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle