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Protein Overview: SPBC947.04

General Information:
Name(s) found: SPBC947.04 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • DIPSY family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 973 amino acids

    Gene Ontology:
    Cellular Component: external side of cell wall [TASLink to PubMed article]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: cell adhesion [TASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFPQILLR LLFLAFTLKS TSNAEKHDKV DYKDFVRRDD GDTCLRYTTI YSQGEYETTI  60
   61 TIPPNSYSNG VSLSNGTLLS TSSPLISTSG QFTSNNVSTT SSQRHNTKTI TFFSGTSDYT 120
  121 SVYYDTTGTD DVVYEYHPSS ERHKSTNDTW STNLPTNPTT TAIYSTSGSS NITTPYSNRI 180
  181 TNSNTSVNDI TSKYLSVGTI TLTTISGSDL YTSTFPANGT TSGTVEVVIP TAGTVTETAV 240
  241 SGSELYTSTF PANGTTSGTV EVVIPTAGTR TVTKISGSKF FTTTTDASGT VSGTVEVVLP 300
  301 TAGTNTMTVV SGSRFFTSVV SASGTVSGEQ VIVYPTAGMV TETIVSGSEI FNTTYPASGT 360
  361 RTGTVEVVIP TAGTVTETEI SGSELYTSTF PANGTTSGTV EVVIPTAGTR TVTKISGSKF 420
  421 FTTTTDASGT VSGTVEVVLP TAGTNTMTVV SGSRFFTSVV SASGTVSGEH IIVEPTAGVV 480
  481 TETVVSGSVG YTTTYPAHDT VSGTVEVVEP TAGVVTETVV SGSVGYTTAY PAHDTVSGTV 540
  541 EVVEPTAGVV TETVVSGSVG YTTTYPAHDT VSGTVEVVEP TAGVVTETVV SGSVGYTTTY 600
  601 PAHDTVSGTV EVVEPTAGVV TETVVSGSVG YTTTYPAHDT VSGTVEVVEP TAGVVTETVV 660
  661 SGSVGYTTTY PAHDTVSGTV EVVEPTAGVV TETVVSGSVG YTTTYPAHDT VSGTVEVVEP 720
  721 TAGVVTETVV SGSVGYTTTY PAHDTVSGTV EVVEPTAGVV TETVVSGSVG YTTTYPVQGT 780
  781 VSGTVMIVEP TAGYVTVTTS LGSSSYATTV ATASGTSTGT VLQVVPSLFP GCNSKCTSSN 840
  841 AFRILVENDS ISPSYLTYRE SDGFGIASSN PSPAGSEGIF YYDSTLKRVV TCCDERPYYR 900
  901 TMEGDLAKTY FFIEDEGDGT YKFKLTYGAF SEYLDVKILA DSTFFFKAMD SSSSTILNQK 960
  961 VRASNVYFKA VPL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..256] deduced N/A No confident structure predictions are available.
    2 View Details [257..519] MSA 2.073983 View MSA. No confident structure predictions are available.
    3 View Details [520..769] deduced N/A No confident structure predictions are available.
    4 View Details [770..873] deduced N/A Confident ab initio structure predictions are available.
    5 View Details [874..973] deduced N/A Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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