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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SPBC947.04
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLFPQILLR LLFLAFTLKS TSNAEKHDKV DYKDFVRRDD GDTCLRYTTI YSQGEYETTI  60
   61 TIPPNSYSNG VSLSNGTLLS TSSPLISTSG QFTSNNVSTT SSQRHNTKTI TFFSGTSDYT 120
  121 SVYYDTTGTD DVVYEYHPSS ERHKSTNDTW STNLPTNPTT TAIYSTSGSS NITTPYSNRI 180
  181 TNSNTSVNDI TSKYLSVGTI TLTTISGSDL YTSTFPANGT TSGTVEVVIP TAGTVTETAV 240
  241 SGSELYTSTF PANGTTSGTV EVVIPTAGTR TVTKISGSKF FTTTTDASGT VSGTVEVVLP 300
  301 TAGTNTMTVV SGSRFFTSVV SASGTVSGEQ VIVYPTAGMV TETIVSGSEI FNTTYPASGT 360
  361 RTGTVEVVIP TAGTVTETEI SGSELYTSTF PANGTTSGTV EVVIPTAGTR TVTKISGSKF 420
  421 FTTTTDASGT VSGTVEVVLP TAGTNTMTVV SGSRFFTSVV SASGTVSGEH IIVEPTAGVV 480
  481 TETVVSGSVG YTTTYPAHDT VSGTVEVVEP TAGVVTETVV SGSVGYTTAY PAHDTVSGTV 540
  541 EVVEPTAGVV TETVVSGSVG YTTTYPAHDT VSGTVEVVEP TAGVVTETVV SGSVGYTTTY 600
  601 PAHDTVSGTV EVVEPTAGVV TETVVSGSVG YTTTYPAHDT VSGTVEVVEP TAGVVTETVV 660
  661 SGSVGYTTTY PAHDTVSGTV EVVEPTAGVV TETVVSGSVG YTTTYPAHDT VSGTVEVVEP 720
  721 TAGVVTETVV SGSVGYTTTY PAHDTVSGTV EVVEPTAGVV TETVVSGSVG YTTTYPVQGT 780
  781 VSGTVMIVEP TAGYVTVTTS LGSSSYATTV ATASGTSTGT VLQVVPSLFP GCNSKCTSSN 840
  841 AFRILVENDS ISPSYLTYRE SDGFGIASSN PSPAGSEGIF YYDSTLKRVV TCCDERPYYR 900
  901 TMEGDLAKTY FFIEDEGDGT YKFKLTYGAF SEYLDVKILA DSTFFFKAMD SSSSTILNQK 960
  961 VRASNVYFKA VPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle