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Protein Overview: SPCC1235.01

General Information:
Name(s) found: SPCC1235.01 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • sequence orphan [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 658 amino acids

    Gene Ontology:
    Cellular Component: external side of fungal-type cell wall [NAS]
    cytosol [IDALink to PubMed article]
    Biological Process: cellular response to stress [IEPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATIIAAIT ITTIVIITPM EEITTMTIPM EEITTMTIPM EEITTMTIPM EEITTMTTPM  60
   61 EEITTITTPM EETTTITPMV ETTTILPMAA MTTPMVETTT IPTVETTTTP MVETTTITPM 120
  121 VETTTITPMV EAMITLMEET MTTPMEETTT ILPMAAMTTP MEETTTTTPM VETTTIPTVE 180
  181 TMTTPMVEAM TILPMAAMTT PMEETTTTPM EETTTTPMVE TMITPMVEAM TTPTEVVGRS 240
  241 MVSTIRTTTP MEAMITPTVE TTTLPTAAMT TPVEETTTTP MVETMITPTV VTTTTPMVET 300
  301 MITPTVVTTT PMVILVMAVV METTINIVGN NDSIPSQNFK SGKTFVSNAN SSNSNDGSSS 360
  361 KSLDVGSFVN AFKQLNVNDN SSNNNSSGNT DSSTIGYAAV FAAAGKFFSQ HSCDLASGNK 420
  421 SAQEGQNQFL SMVESEAKNL MNKTNYSANQ SQNGNSQNSG NPVSQAIDLA KSLFQNRNLL 480
  481 TKLAQSGVLT NAAQGSSGGL SAAAVSGLIG SFMGSSSNNS NSSNNNSNTS NNNSNTSNNE 540
  541 SMVSKLSSLS GMASSFLGSS GNNNNNNNSN SGNYNNNNSG NNNQQHQQSS SSLQGLASSF 600
  601 LNSSSGNSNK QNYNNNNNQN YGNNNNQNYN NNNNSSQGGN SQGGSGLLGQ AVNMFLKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] FFAS03 4.71 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
    2 View Details [364..658] FFAS03 5.33 30S subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.72

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle