YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: swi1

General Information:
Name(s) found: swi1 / SPBC216.06c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • replication fork protection complex subunit Swi1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 971 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    replication fork protection complex [TASLink to PubMed article]
    Biological Process: DNA replication checkpoint [IGILink to PubMed article]
    replication fork protection [IDALink to PubMed article]
    mating type determination [IMPLink to PubMed article]
    replication fork arrest [IDALink to PubMed article]
    negative regulation of mitotic recombination [IDALink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]
    protein heterodimerization activity [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELDEVIQGI VSAIGGFDYS DDEKVYVLGD EALACLKDLK RYLQVVDEKY KVWQIRSLLS  60
   61 SLQLVTNDIC PILSDWDKDI TNYRNWRIAL ACVELLVPLT WPLETEHETF RENVDVLYNL 120
  121 RQAQSNYKNS ILSYKKGSVL SAILAVLLKP LSTPAESRTL RDKGIIRIVL LLFRNILQID 180
  181 ELKTKNETII SFAKAHILDL IVTLVSNLDE FEHFDVYILE IVYNLIRGCK PSALFSDASL 240
  241 TNSQTELNSL LLKESTQNRY LKRNAHTRHN RFGTMLSVQT EDRRFTIASQ NIKTDGLDEL 300
  301 DSHKRFRKRG TRRKHFDDIN KSFFINTEAG TALRNFAVEF LEAGFNPLFQ SLLKDLERED 360
  361 PRVLPIHKMQ LLYVQSFFLE FMRFSSKPKK TEEIYSNDYS FGLAASVFDQ RALIMHNRLM 420
  421 VESFEMKQWS TFQASMLSMT QLLFTLRSMT LCSSEIYQRI ADNLLSNIFY QEEILLLVYS 480
  481 ALKHFKTQSF GYLDAITELT IVLLKELEKF SSAKQYLYVK KRRRNQKSVD SNVLESDEDE 540
  541 ESSLINANAA VEDRLFDFGR YESRYCDNGC IDSFVLFLQC YQDLDSKQIH RAISFFYRIF 600
  601 VKQKCHVYLY RLDFLRVLDK MFNDHVYFST TNSARQDFEQ FFVYYMRKLS DALKDVPALF 660
  661 IELPFPKLTD TFYYLEYGKS PLFSIHGSRK GPLYETVPGL SHLEKVAAVV ACLINENKSD 720
  721 LLDELKVQLN CLISERKLIT LADENKYINE GGNDGERMGK NLKGDTDSFN TALLKDGKFR 780
  781 LLLELCGFEE SDNNIDVQAL WKLPNSVIID ELVEHAMLLR RFTDDPPTFE GTKPEDLLVR 840
  841 KQRGNVRLPS SSEGETSDEE IEFEADDPIT FANRREALNK ITDRKRKKMK TNETIIDHTT 900
  901 RKKKENHLRS AKYIVDSDDD SETDIAFFQS EAALREKNAQ KASALFKRID DLEMEGKLQE 960
  961 IEQLSENSSS D

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..218] MSA 1.018976 View MSA. No confident structure predictions are available.
    2 View Details [219..397] MSA 1.02198 View MSA. No confident structure predictions are available.
    3 View Details [398..554] deduced N/A No confident structure predictions are available.
    4 View Details [555..664] MSA 1.016971 View MSA. Confident ab initio structure predictions are available.
    5 View Details [665..749] deduced N/A No confident structure predictions are available.
    6 View Details [750..971] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle