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Protein Overview: SPBC2A9.11c

General Information:
Name(s) found: SPBC2A9.11c [Sanger Pombe]
Description(s) found:
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  • pir||T40102 conserved hypothetical protein SPBC2A9.11c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|4539264|emb|CAB39853.1| nuclear export factor [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113013|ref|NP_596221.1| nuclear export factor [Schizosaccharomyces pombe] [NCBI NR]
  • gi|121773053|sp|Q1MTP1.1|YGIB_SCHPO RecName: Full=UPF0666 protein C2A9.11c [NCBI NR]
  • nuclear export factor [Sanger Pombe]
  • UPF0666 protein C2A9.11c OS=Schizosaccharomyces pombe GN=SPBC2A9.11c PE=3 SV=1 [Swiss-Prot]
  • CONSERVED PROTEIN CONSERVED PROTEIN; CONTAINS PFAM-B_14616 DOMAIN: O74795;Q9UUM3; [pompepVF.fasta]
  • CONSERVED HYPOTHETICAL PROTEIN CONSERVED HYPOTHETICAL PROTEIN; CONTAINS PFAM-B_14616 DOMAIN: O74795;Q9UUM3; [pompepV13]
  • Hypothetical 46.2 kDa protein C2A9.11C in chromosome II [pompep4896]
  • ||SPBC2D10.01c|conserved eukaryotic protein [pompepnew.fasta]
  • ||SPBC2D10.01c|conserved eukaryotic protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • conserved hypothetical protein [Schizosaccharomyces pombe]gi|4539264|emb|CAB39853.1| SPBC2A9.11c [Schizosaccharomyces pombe]gi|7490333|pir||T40102 conserved hypothetical protein SPBC2A9.11c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (Q9UUM3) Hypothetical 46.2 kDa protein C2A9.11C in chromosome II [pompep4896_normal_reversed]
  • ||SPBC2D10.01c|nuclear export factor |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC2A9.11c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC2A9.11c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • ||SPBC2D10.01c|nuclear export factor|Schizosaccharomyces pombe|chr 2|||Manual [spombe-190209-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: nuclear export [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKEHHSPWP DSLKEFIGRC IQDAEENSQP ELEDEVKLLI SRQYEMGNIW NVDWSSMNLE  60
   61 SLRKLTNAQN TIIEDKKRKV EKPVSGNQFS LLSEEDEVDK KEKRRRRFEN GSRSQNNAKS 120
  121 EELKVNPENG AIIGRSTELE KRYLRLTSAP DPDTVRPLPV LKQTLELLKK KWKEEKNYAY 180
  181 ICDQFKSLRQ DLTVQRIQNE FSVLVYEIHA RIALEKGDVG EYNQCQTQLF HLYSFGIPGN 240
  241 TKEFLAYRIL YMLFTKNRSE MNSLLANLKE EDKTNAAVTH ALEVRSAMAT GDYYKFFHLY 300
  301 LVAPNMGGYL MDLFIERERV QAMIMMCKAY RPSLTMEFLA NTLAFEEMED CVNFFRSCNA 360
  361 VYDSKDPNRI LMKESTDRFE KCMKKHAVVD IKGQI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..63] MSA 1.059991 View MSA. No confident structure predictions are available.
    2 View Details [64..171] MSA 3.114993 View MSA. No confident structure predictions are available.
    3 View Details [172..395] FFAS03 1.63 Crystal Structure of Human eIF3k


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle