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Protein Overview: SPCC1442.17c

General Information:
Name(s) found: SPCC1442.17c [Sanger Pombe]
Description(s) found:
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  • pir||T40982 hypothetical protein SPCC285.02c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626860|sp|O74490|IST1_SCHPO IST1 homolog [NCBI NR]
  • gi|3790262|emb|CAA21451.1| MVB sorting pathway protein (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|3581902|emb|CAA20841.1| SPCC1442.17c [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19075831|ref|NP_588331.1| DUF292 family protein [Schizosaccharomyces pombe] [NCBI NR]
  • DUF292 family protein [Sanger Pombe]
  • IST1 homolog OS=Schizosaccharomyces pombe GN=SPCC1442.17c PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE IST1/YNL265C HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE IST1: O74490; [pompepVF.fasta]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE IST1/YNL265C: O74490; [pompepV13]
  • Hypothetical 30.8 kDa protein C285.02c in chromosome III [pompep4896]
  • ||SPCC285.02c|hypothetical protein [pompepnew.fasta]
  • SPCC285.02c protein (Spcc1442.17c protein) [4896.FASTAC]
  • ||SPCC285.02c|hypothetical protein|Schizosaccharomyces pombe|chr 3|||Manual [pombe041504.fasta]
  • ||SPCC285.02c|conserved eukaryotic protein|Schizosaccharomyces pombe|chr 3|||Manual [pompep2242005.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|3581902|emb|CAA20841.1| SPCC285.02c [Schizosaccharomyces pombe]gi|3790262|emb|CAA21451.1| SPCC1442.17c [Schizosaccharomyces pombe]gi|7491808|pir||T40982 hypothetical protein SPCC285.02c - fission yeast [nrdb_11152004_Chlamydomonas]
  • (O74490) Hypothetical 30.8 kDa protein C285.02c in chromosome III [pompep4896_normal_reversed]
  • |ist1|SPCC285.02c|MVB sorting pathway protein |Schizosaccharomyces pombe|chr 3|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPCC1442.17c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPCC1442.17c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Vacuolar protein sorting-associated protein ist1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ist1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    endosome [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: protein targeting to vacuole [ICLink to PubMed article]
    late endosome to vacuole transport via multivesicular body sorting pathway [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLQIQLKL AASRIEILRQ KEEALAKQAR RNVALGLKSY SPALAKARIE PLIMQDIYIE  60
   61 LLELLQVDVE ILANRCVVLE KRAFNDSMSF KSSLYHVMAA APQLQIKELR FVHDFLVKLY 120
  121 GKEFARLSDP DLATNDTAFY QLLYPPIPKD ELVEAYRKEL IRTYFPNDYP KEANKDIPSS 180
  181 AEADTMLNLE SSENREQPTS LKEENTQEDD EKVNGNLANI SKRAEPQNNG STNASSLQSS 240
  241 NYLPTNPTLT HSNKAPSFEE LAARLDRLKH L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] Pfam 61.508638 No description for PF03398.5 was found. No confident structure predictions are available.
    2 View Details [185..271] MSA 1.045991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle