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Protein Overview: SPCC1442.17c

General Information:
Name(s) found: SPCC1442.17c [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • DUF292 family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 271 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    endosome [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed article]
    Biological Process: protein targeting to vacuole [ICLink to PubMed article]
    late endosome to vacuole transport via multivesicular body sorting pathway [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRLQIQLKL AASRIEILRQ KEEALAKQAR RNVALGLKSY SPALAKARIE PLIMQDIYIE  60
   61 LLELLQVDVE ILANRCVVLE KRAFNDSMSF KSSLYHVMAA APQLQIKELR FVHDFLVKLY 120
  121 GKEFARLSDP DLATNDTAFY QLLYPPIPKD ELVEAYRKEL IRTYFPNDYP KEANKDIPSS 180
  181 AEADTMLNLE SSENREQPTS LKEENTQEDD EKVNGNLANI SKRAEPQNNG STNASSLQSS 240
  241 NYLPTNPTLT HSNKAPSFEE LAARLDRLKH L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] Pfam 61.508638 No description for PF03398.5 was found. No confident structure predictions are available.
    2 View Details [185..271] MSA 1.045991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle