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Protein Overview: apl4

General Information:
Name(s) found: apl4 / SPCP1E11.06 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • AP-1 adaptor complex gamma subunit Apl4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 865 amino acids

    Gene Ontology:
    Cellular Component: endosome [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    AP-1 adaptor complex [IDALink to PubMed article]
    Golgi apparatus [IDALink to PubMed articleLink to PubMed article]
    Biological Process: vesicle-mediated transport [IMPLink to PubMed article]
    endosome transport [IMPLink to PubMed article]
    intracellular protein transport [ICLink to PubMed article]
    Molecular Function: protein transporter activity [IEA]
    clathrin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTTHPKNLH LTCSGVERGF TNSPKTHPKM SSLKSFIKAV RASKTTAEEH TTILKESAQI  60
   61 RKNIRQGSND MRMRRKNVAK LLYLFLLGEP THFGQIECLK LLSSSRFMDK RLGYLAAMLL 120
  121 LDENQEVLTL LTNSLQNDLK SRDKFIVGLA LSAFGNVAGP ELARDLSNDI AELCSNHHNY 180
  181 ISKKAVLCAL RVIQKEPDLE SLYIEKTDEL LHSKSHGVLM AALAFAISAC KINPSLISRF 240
  241 ESQADDLIYR IRQLSTSTYS SEHNIGNISD PFLQVKILQF LSILGQNNPK IYDKMSDLLA 300
  301 QVCTNTDSSR NAGNAILYQA VRTILDLNSD SSLRVLGVNI LAKFLGNRDN NTRYVALNML 360
  361 KLVVNSEENA VQRHRSTILA CLNDVDSSIQ SRALELSTFL VNEANVRFMV RELLSFLDNV 420
  421 SDELRGSTAQ YITEVTNAFA PNKRWHFDTL LRVFKSAGNF VSESTLSTFL RLIASAPELH 480
  481 EYAVVKLYAA LKEDVSQEAL TLSAFWVIGE YGQMLLSPTM NFDDDQTLPH SVSESDIVDI 540
  541 IEEVFNSVEA SRYIIVQYGL FALTKLSARL GSSSTASRID KIIYSYKRNK NTEVQQRSVE 600
  601 FHLILNDSKL SKTILEPTPA PLPPPRTTPY QNAEQKLKAN KHVEKRVQES NELLDLIGLT 660
  661 TPSVAEPLET PVDEMTQSPQ SSLSRAPSTS KKSHFEDILG LFASPAPSAQ PVDSLASSFA 720
  721 SLDFNASASQ PSNNLSLLSS IPSTSKSYPP IVVFDKHDVT LTLVPSKEES TKTAVIEAKF 780
  781 KNKNPMTRVE KIHLEVAVPK SQKLKIQPLR TTSMEPGGET SQTLRVHGPS GSQVKLRLRI 840
  841 SVVRQGGSNT LDQVDFGKLP SDLLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..678] PSI-BLAST 114.0 AP1 clathrin adaptor core
    2 View Details [679..865] PSI-BLAST 28.69897 Gamma1-adaptin domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • protein binding
    		•  1.57801165255065 bayes_pls_golite062009
  • binding
    		•  1.4853299341494 bayes_pls_golite062009
  • transporter activity
    		•  1.4237388137024 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle