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Protein Overview: SPAC17A2.12

General Information:
Name(s) found: SPAC17A2.12 [Sanger Pombe]
Description(s) found:
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  • pir||T37813 probable DNA repair protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74675924|sp|O13762.1|YF2C_SCHPO RecName: Full=Uncharacterized ATP-dependent helicase C17A2.12 [NCBI NR]
  • gi|2414584|emb|CAB16565.1| ATP-dependent DNA helicase (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115158|ref|NP_594246.1| ATP-dependent DNA helicase [Schizosaccharomyces pombe] [NCBI NR]
  • ATP-dependent DNA helicase [Sanger Pombe]
  • Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe GN=SPAC17A2.12 PE=2 SV=1 [Swiss-Prot]
  • ZINC FINGER PROTEIN; ZF-C3HC4 TYPE (RING FINGER); HELICASE; PUTATIVE DNA REPAIR PROTEIN: O13762; [pompepVF.fasta]
  • HELICASE; PUTATIVE DNA REPAIR PROTEIN: O13762; [pompepV13]
  • Helicase [pompep4896]
  • |||zinc finger protein [pompepnew.fasta]
  • SPAC17A2.12 protein [4896.FASTAC]
  • |||zinc finger protein|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • helicase; putative DNA repair protein [Schizosaccharomyces pombe]gi|2414584|emb|CAB16565.1| SPAC17A2.12 [Schizosaccharomyces pombe]gi|7492537|pir||T37813 probable DNA repair protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (O13762) Helicase [pompep4896_normal_reversed]
  • |||ATP-dependent DNA helicase |Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC17A2.12 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC17A2.12 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Uncharacterized ATP-dependent helicase C17A2.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17A2.12 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 897 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nuclear chromatin [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    chromatin remodeling complex [ISSLink to PubMed article]
    Biological Process: DNA repair [ISSLink to PubMed article]
    chromatin remodeling [ISSLink to PubMed article]
    protein ubiquitination [ISSLink to PubMed article]
    Molecular Function: ubiquitin-protein ligase activity [ISSLink to PubMed article]
    DNA binding [IEA]
    ATP binding [IEA]
    zinc ion binding [ISSLink to PubMed article]
    ATP-dependent DNA helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSLSAYPPQ STFQQLQNDE ELARRLQDEW NSSSPSSAPS SSSSQNQVEL DEQFARSLQN  60
   61 SQSSSYSLPP FDHPPSKNPT SSSLSTRKRW RQKRLWSFKN FPFRPPTRLT STPSNSSSLP 120
  121 SIPSSSSTPS ISSIPHTTSS VSNDIPSVLG SSDHPIDLDN PEHLTPPSSF ITAKQLSRLP 180
  181 TPLPPPSSSS LPTGTISTNS FCPYERKVQP EHVTKELHQL LQHNTPSPFD TIDLQLKNEQ 240
  241 VQSAGLLVSL LPHQVEGHAW MESMEQSSKC GGVMADDMGL GKTIQTIALL LTQKSQDPLR 300
  301 KTNLIVVSVA LLHQWAEELS TKVHPSKKLS VYIHHGSTKK NLDSYELSQY DVVLTTYSML 360
  361 AYEMKQNDAF NNNNPATATP PPACSLLETS WYRIVLDEAH TIRNRDTLAA KCCVKLDAKY 420
  421 RWCLSGTPIQ NHIDEFYSLL KFLRIKPYCV WSLFAKDISR PLKSYRADIV EAALKRLRIL 480
  481 LASTVFRRTK ETRVNNLPIV NLPPKTIRTV SVNLLPEERA LYNEQMSSAQ SLVDNYFNND 540
  541 HDLSRYGFLL VSLLRLRQFC CHPWLVKSSS LDNSFRIRDS ENVRNACKSL DPLTIERIAT 600
  601 LQDFNCSVCL DPCLAPVFII PCGHFTCQEC MSMLVGQKYG SSSTSTIIAK CPMCRGNIVQ 660
  661 DSLVDATILQ AIHGPLNSLK QLELDMNQSF SEQESIKLRW ENRIDQMFTK KFGKRASEWK 720
  721 SSSKLNQARQ TILDIIGSKR NEKILVYSQF SQYLCLVSHM LKLENIRHVR YDGTMSANQR 780
  781 QKSLHSFNND KDVLVMLVSL KAGSVGLNLT IANHVILQEP FYNPSIEDQA IDRVHRLGQQ 840
  841 KPVTVYRFIT KDTIEERIVS VQRKKRQLVK EALDSNENNP LSRLDKEELL YLFGLNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..147] FFAS03 1.03 No description for 2j63A was found.
    2 View Details [148..233] deduced N/A No confident structure predictions are available.
    3 View Details [234..487] PSI-BLAST 42.154902 Sulfolobus solfataricus SWI2/SNF2 ATPase core in complex with dsDNA
    4 View Details [488..576] FFAS03 2.75 Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain
    5 View Details [577..643] PSI-BLAST 26.154902 Initiation factor 4a
    6 View Details [644..897] PSI-BLAST 29.39794 Sulfolobus solfataricus SWI2/SNF2 ATPase C-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle