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Protein Overview: sfc9

General Information:
Name(s) found: sfc9 / SPBC8D2.07c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • transcription factor TFIIIC complex subunit Sfc9 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    transcription factor TFIIIC complex [ISSLink to PubMed article]
    Biological Process: transcription from RNA polymerase III promoter [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKDVALDFL PSSLYSCTCS CDGKLAFCDS EKVQILVPST EANTPKFMKA LAYLDDVEDE  60
   61 LPNCQMLAPN ELRLGDLTPS VISRYVVWSP TGLADNYDPL LTVLTNRHRV YFFSSSSRVL 120
  121 HQKWTCVAQM STHLPSDPLE LCRIHSVAWS PLVSLPSSSP WGVCLFALGA ESGHVHLSIM 180
  181 SHSSTPFFKS FDLNCSWVVQ LSFSSWNVVG DSATCLLSCS SRNGEIRILK IAISSHSDTF 240
  241 DTAMQELPFS LDYRPFSPLL AWSSPLANVE YLALVYPGHL FAFRYDKSLG KFCSFLNHNL 300
  301 LSLCSPSGVL FGHNDIDTIY VYILTHSGTL ETFSLLDNSI SMLDSPERHV LEKFLNNHLQ 360
  361 NYGSVSDDSI KTLKIHGFCP SPYLSSAALH FSISYPASFT YVVTAAERSY FNFIPSLFSK 420
  421 SVFSHMITSS LNNLCVAPSA GCLLEISLMN DTLKEKTDIF TMLTNSLSSF LVTDYDFFLE 480
  481 LKHLIDISSL SNLYLDSSLN AMRLLYGWSV YKQKALDATL LNSLRYRLTL YIMLYTLSQI 540
  541 SLDPSYLTSD CKAVLRNFVS FTYKELAEVP IAMEVANEIA KSLEVSSDFS ETCPACEATV 600
  601 QFNNTSLATC DNGHVWRRCS VTMLLLSQKA AKYCAVCNSI VAIFNPSQTK CLLADLQNEL 660
  661 SICFYCGGHF LVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 1.003986 View MSA. No confident structure predictions are available.
    2 View Details [115..253] deduced N/A No confident structure predictions are available.
    3 View Details [254..379] deduced N/A No confident structure predictions are available.
    4 View Details [380..673] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle