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Protein Overview: SPCC4B3.18

General Information:
Name(s) found: SPCC4B3.18 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • phosphopantothenate-cysteine ligase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 316 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: coenzyme A biosynthetic process [ISSLink to PubMed article]
    Molecular Function: phosphopantothenate--cysteine ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEMDKSNDF FEENPCPNSL GDVSSLIEDF INLQSNSQNI AFVTSGGTLV PLEQNTVRFI  60
   61 DNFSAGNRGA ASAEYFCKSG YSVIFLYRNY SLMPFTRRYE GPWTNLFERS NGSQEKPWIV 120
  121 KQEFQSTVFN ALNELDTYTK HHRLIMIPYT TLTEYLWYLK AIAERLQIIA SRALFYLAAA 180
  181 VSDFHIPPKE LSEHKIQSGS GSNKLEVKMH PVPKFLRFLV DTWAPEASII SFKLETDPSI 240
  241 LIDKARVALQ RYNHQLVIAN LLSTRKRSVA FVTSKTVEWL HLSDDDIVKK VEIEQYIVSR 300
  301 AISLHKERIQ EFAKAP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..316] PSI-BLAST 74.30103 Crystal Structure of Phosphopantothenoylcysteine Synthetase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphopantothenate--cysteine ligase activity
    		•  5.69075768451173 bayes_pls_golite062009
  • phosphopantothenoylcysteine decarboxylase activity
    		•  5.47152792211468 bayes_pls_golite062009
  • ligase activity
    		•  2.22669253992824 bayes_pls_golite062009
  • binding
    		•  1.89072001556053 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  1.60765845284251 bayes_pls_golite062009
  • catalytic activity
    		•  1.32370671504792 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.28899846789805 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.53776941010038 bayes_pls_golite062009
  • protein binding
    		•  0.395135807048731 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.133284065682966 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle