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Protein Overview: SPCC16A11.16c

General Information:
Name(s) found: SPCC16A11.16c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • ARM1 family [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    proteasome regulatory particle, lid subcomplex [ISS]
    Biological Process: ubiquitin-dependent protein catabolic process [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVFGRVRN ETSERGKYGL VSVKAGKLQR KPGTNILQAD HRKGVIYMQM ASDELLHFYW  60
   61 KERARVSREV EDDYIIFPEE AEFIKIDECT TGRVYALKFK SSSQIHFYWM QEYSDEKDKE 120
  121 TASLINQLIA DPVNTTRTIN SHNNSSSRGT DDSSTSQLLQ LFGAASQDAL QDFNWEVLSP 180
  181 TAEAPAILPR FPNVNESANM YRASSESNLN GPHATAGENG EDHEEATASP LDENIDYTHS 240
  241 RTLELLEQLQ PLILNETTFV EPFSIDRESH RVITHPRVYP KIFPHSPSDL LRISGRAELS 300
  301 ENRDFFKHLS SLMEAVAKPE SESLREICNL SLEQVQSASG AELFLHALYD RLVNEGVIVI 360
  361 SHITQEGSDG EVEEEGDVEM RESNEKDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..138] MSA 21.041995 View MSA. No confident structure predictions are available.
    2 View Details [139..222] deduced N/A No confident structure predictions are available.
    3 View Details [223..388] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle