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View Structure Prediction Details

Protein: SPCC16A11.16c
Organism: Schizosaccharomyces pombe
Length: 388 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPCC16A11.16c.

Description E-value Query
Range
Subject
Range
CE30640 - status:Confirmed UniProt:Q09289 protein_id:AAM22055.1
301.0 [0..1] [257..1]
gi|187024004, gi... - gi|39581033|emb|CAE72514.1| Hypothetical protein CBG19693 [Caenorhabditis briggsae], gi|187024004|em...
gi|157758899 - gi|157758899|ref|XP_001671793.1| Hypothetical protein CBG19693 [Caenorhabditis briggsae AF16]
298.0 [0..1] [257..1]
gi|124000251, gi... - gi|61363711|gb|AAX42432.1| adhesion regulating molecule 1 [synthetic construct], gi|124000251|gb|ABM...
ADRM1 - adhesion regulating molecule 1
246.0 [0..3] [162..6]
gi|109091383, gi... - gi|109091387|ref|XP_001089025.1| PREDICTED: adhesion regulating molecule 1 isoform 3 [Macaca mulatta...
246.0 [0..3] [162..6]
ADRM1_CHICK - Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus GN=ADRM1 PE=2 SV=1
246.0 [0..3] [162..6]
gi|73992412 - gi|73992412|ref|XP_867592.1| PREDICTED: similar to Adhesion regulating molecule 1 precursor (110 kDa...
246.0 [0..3] [162..6]
ADRM1_RAT - Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus GN=Adrm1 PE=1 SV=2
244.0 [0..3] [162..6]
ADRM1_XENTR - Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis GN=adrm1 PE=2 SV=1
244.0 [0..3] [162..5]

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Predicted Domain #1
Region A:
Residues: [1-138]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVFGRVRN ETSERGKYGL VSVKAGKLQR KPGTNILQAD HRKGVIYMQM ASDELLHFYW  60
   61 KERARVSREV EDDYIIFPEE AEFIKIDECT TGRVYALKFK SSSQIHFYWM QEYSDEKDKE 120
  121 TASLINQLIA DPVNTTRT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [139-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INSHNNSSSR GTDDSSTSQL LQLFGAASQD ALQDFNWEVL SPTAEAPAIL PRFPNVNESA  60
   61 NMYRASSESN LNGPHATAGE NGED

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [223-388]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HEEATASPLD ENIDYTHSRT LELLEQLQPL ILNETTFVEP FSIDRESHRV ITHPRVYPKI  60
   61 FPHSPSDLLR ISGRAELSEN RDFFKHLSSL MEAVAKPESE SLREICNLSL EQVQSASGAE 120
  121 LFLHALYDRL VNEGVIVISH ITQEGSDGEV EEEGDVEMRE SNEKDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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