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Protein Overview: SPAC17H9.12c

General Information:
Name(s) found: SPAC17H9.12c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • NADH-cytochrome reductase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 266 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial intermembrane space [ISSLink to PubMed article]
    mitochondrion [IDALink to PubMed article]
    integral to membrane [IEA]
    mitochondrial outer membrane [ISSLink to PubMed article]
    Biological Process: ergosterol biosynthetic process [ISSLink to PubMed article]
    cellular response to oxidative stress [ISSLink to PubMed article]
    Molecular Function: cytochrome-b5 reductase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTYRKLP KILAAGLAIG CAGGYYAYKN SNKPPGLNPE IYAPFTVNKI TELTSDASLF  60
   61 SLVPQSPSEH LTTLEPIAKV TIRDPSMQVQ RPYTPLYLDA NELKFFIRKY EEGPVSSYIH 120
  121 SKKEGDTIEL RGPFKTTKLD CTKYPRIVAI VAGTGIAPIY QLAQSVKSPV DIVYCSRPGQ 180
  181 PPLLKEELEK ECPNVRVKSV QNRLVNIHDI LDWDNVTVPL KDTLCIVCGS QKFVSTIAGP 240
  241 KADYGARQGE VKGLLSNNPF GKVWKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..266] PSI-BLAST 46.522879 Benzoate dioxygenase reductase; Benzoate dioxygenase reductase, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  2.21078243979773 bayes_pls_golite062009
  • ferredoxin-NADP+ reductase activity
    		•  1.46342400843015 bayes_pls_golite062009
  • ferredoxin reductase activity
    		•  1.46342400843015 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
    		•  1.46342400843015 bayes_pls_golite062009
  • catalytic activity
    		•  1.45374095556065 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH, heme protein as acceptor
    		•  1.42015329094031 bayes_pls_golite062009
  • cytochrome-b5 reductase activity
    		•  1.03329517603164 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  0.90349352746963 bayes_pls_golite062009
  • binding
    		•  0.778669708390896 bayes_pls_golite062009
  • riboflavin synthase activity
    		•  0.380537461428523 bayes_pls_golite062009
  • coenzyme binding
    		•  0.377407140593246 bayes_pls_golite062009
  • transferase activity
    		•  0.00498326987177106 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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