YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SPAC17H9.12c
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSTYRKLP KILAAGLAIG CAGGYYAYKN SNKPPGLNPE IYAPFTVNKI TELTSDASLF  60
   61 SLVPQSPSEH LTTLEPIAKV TIRDPSMQVQ RPYTPLYLDA NELKFFIRKY EEGPVSSYIH 120
  121 SKKEGDTIEL RGPFKTTKLD CTKYPRIVAI VAGTGIAPIY QLAQSVKSPV DIVYCSRPGQ 180
  181 PPLLKEELEK ECPNVRVKSV QNRLVNIHDI LDWDNVTVPL KDTLCIVCGS QKFVSTIAGP 240
  241 KADYGARQGE VKGLLSNNPF GKVWKL

Type	Start	End	Confidence
Signal Peptide	1	24	0.91
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	266	0.99