YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: mug71

General Information:
Name(s) found: mug71 / SPBC577.12 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • endoribonuclease [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 606 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: ATP binding [IEA]
    endoribonuclease activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLGLISGG KDSCFNLMHC VSLGHEVVAL ANLHPEDGKD EIDSFMYQSV GHDVIPLYAE  60
   61 CFDLPLYREK IGGQSINQNL DYQFTEKDET EDLYRLIKRV LTNHPDLEAV STGAILSTYQ 120
  121 RTRVENVCKR LGLKSLSFLW QKDQEKLLND MVVSGLNAIL IKVAAIGLTR KDLGKSLAEM 180
  181 QDKLLTLNKK FELHPCGEGG EYETLVLDCP LFKKRIVLTD KEVVEHSSGE VCYLKVKACV 240
  241 KDKPEWQPIS LKSELVPNEE LLGEEYSHIY HTISKKYELI DDQEETPTSL IPIPLRESAF 300
  301 QQKKGSFLVL GNVVATKGSY NTFQGEAESA INNLNELLGT YGYSNKNVYF VTVILSSMSK 360
  361 FAEFNSVYNK YFDFTNPPSR SCVAAPLASE YRIVMSCIVG DVTEKRALHV QGQSYWAPAN 420
  421 IGPYSQSICA NGVVFISGQI GLIPSVMELK LHDKIFEMVL ALQHANRVAK AMRVGSLIAC 480
  481 LAYVCDSRDA DCVVKIWSEY TKNTGESSPV LVALVDALPR NASVEWQLLY NDSSCDVPLL 540
  541 SSLVTNQTLF GSDTAWDVAL LNQNGLRMES SFIHHEHPSA YAIVLNNAFP NSQLLHVRYT 600
  601 ARDQNV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..279] PSI-BLAST 63.045757 Crystal Structure of PH1257 from Pyrococcus horikoshii OT3
    2 View Details [280..404] PSI-BLAST 37.522879 Purine regulatory protein YabJ
    3 View Details [405..606] PSI-BLAST 44.39794 No description for 2dyyA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ligase activity
    		•  2.99185607397345 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.14663773925119 bayes_pls_golite062009
  • DNA binding
    		•  0.992954560970173 bayes_pls_golite062009
  • catalytic activity
    		•  0.828867994386867 bayes_pls_golite062009
  • binding
    		•  0.752095595503409 bayes_pls_golite062009
    2
    Term Confidence Notes
  • ribonuclease activity
    		•  2.55513289511254 bayes_pls_golite062009
  • nuclease activity
    		•  1.95684086528131 bayes_pls_golite062009
  • endonuclease activity
    		•  1.93161199243014 bayes_pls_golite062009
  • binding
    		•  1.28584712198396 bayes_pls_golite062009
  • endoribonuclease activity
    		•  1.18839679198466 bayes_pls_golite062009
  • catalytic activity
    		•  1.00848565859536 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.659253495197665 bayes_pls_golite062009
  • hydrolase activity
    		•  0.213547115506972 bayes_pls_golite062009
  • protein binding
    		•  0.147266452718662 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle