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Protein Overview: tsf1

General Information:
Name(s) found: tsf1 / SPBC800.07c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • mitochondrial translation elongation factor EF-Ts Tsf1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 299 amino acids

    Gene Ontology:
    Cellular Component: mitochondrial matrix [IGILink to PubMed article]
    Biological Process: regulation of catalytic activity [ICLink to PubMed article]
    mitochondrial translation [RCALink to PubMed article]
    translational elongation [IGILink to PubMed article]
    positive regulation of translational elongation [ICLink to PubMed article]
    Molecular Function: GTP binding [ICLink to PubMed article]
    translation elongation factor activity [IMPLink to PubMed article]
    guanyl-nucleotide exchange factor activity [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFQRRLHFH QFFGKTRVTG SLSRQWYSKL PSKLADIKKL RSETNASMDL VKQSVEEAGV  60
   61 GNLELAREIL KKKIVQRGGK LAEKSKNRTA KEGWIIQCIS EDGRKAVMAE INCESDFVAQ 120
  121 TTPFQDLARR IASTFLHYLP TNHSSYSVEA TLKNEILKHQ AYVSKNHEAN EKDVSSNVSL 180
  181 EEEIVKMTSF TGEKVQVQRL HCMNARVPST AIGIFSHGAK QSSPLQQLGR IGSMVQINSD 240
  241 LSTRKGLSNQ IAKEIVAQDP SSTSELLSFR SLVDSEKTIK DVLGQSTILE WVRWERGGN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..299] PSI-BLAST 60.154902 Crystal Structure of Bos taurus mitochondrial Elongation Factor Tu/Ts Complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation elongation factor activity
    		•  2.25105802083938 bayes_pls_golite062009
  • binding
    		•  1.38178580050618 bayes_pls_golite062009
  • small conjugating protein binding
    		•  0.985424343145381 bayes_pls_golite062009
  • ubiquitin binding
    		•  0.83381750627184 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.615703185217616 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.422128973505256 bayes_pls_golite062009
  • protein binding
    		•  0.378700375319735 bayes_pls_golite062009
  • DNA binding
    		•  0.262676519883369 bayes_pls_golite062009
  • catalytic activity
    		•  0.25774924710417 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle