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Protein Overview: chr1

General Information:
Name(s) found: chr1 / SPBC3E7.12c [Sanger Pombe]
Description(s) found:
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  • pir||T40386 hypothetical protein SPBC3E7.12c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626743|sp|O59732.1|CHR1_SCHPO RecName: Full=Chitin synthase regulatory factor 1; AltName: Full=Chs four homolog 4 [NCBI NR]
  • gi|3130038|emb|CAA19015.1| chitin synthase regulatory factor Chr1 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112891|ref|NP_596099.1| chitin synthase regulatory factor (putative) Chr1 [Schizosaccharomyces pombe] [NCBI NR]
  • chitin synthase regulatory factor Chr1 [Sanger Pombe]
  • Chitin synthase regulatory factor 1 OS=Schizosaccharomyces pombe GN=chr1 PE=1 SV=1 [Swiss-Prot]
  • VERY PUTATIVE CHITIN SYNTHASE REGULATORY FACTOR: O59732; [pompepVF.fasta]
  • Very putative chitin synthase regulatory factor [pompep4896]
  • |reserved_name_cfh4||Chs Four Homologue (pers. comm. Henar Montero) [pompepnew.fasta]
  • SPBC3E7.12c protein (Reserved_name_cfh4 protein) [4896.FASTAC]
  • |cfh4||Chs Four Homologue (pers. comm. Henar Montero)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • very putative chitin synthase regulatory factor [Schizosaccharomyces pombe]gi|3130038|emb|CAA19015.1| SPBC3E7.12c [Schizosaccharomyces pombe]gi|7491656|pir||T40386 hypothetical protein SPBC3E7.12c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |cfh4||Chs Four Homologue |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O59732) Very putative chitin synthase regulatory factor [pompep4896_normal_reversed]
  • |chr1|cfh4|chitin synthase regulatory factor Chr1 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • Chitin synthase regulatory factor 1 (Chs four homolog 4) [nr-271106-contam.fasta]
  • hypothetical protein SPBC3E7.12c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC3E7.12c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |cfh4||chitin synthase regulatory factor Cfh4 |Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Chitin synthase regulatory factor 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=chr1 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 456 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: fungal-type cell wall polysaccharide biosynthetic process [TASLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPASTSIPET PSKLPDALLV NSDPASKVDN VSVKIEQESP LALEGSPLPT VSDVLPETNN  60
   61 AHEEVSSSSW SLSSSDSIMS YDSLSDDVSV LSFLDCPLTT FETAPSIASF SNSAADVSSH 120
  121 SRSSSSWSAK LSRFTKHASK PSLSSNSSDS SFSKSGSESN ALSSRGSFEL EPHGIHRHVS 180
  181 RAKRLLSKFY SKFHHKKEDS SFDPLAPLVF APNTSRVLRV TNEANASAIS LEKATSLSSQ 240
  241 EQPGSEIKKE LSLYDHEFDQ ILDLAIKAKK DGNLENAIEF LEYIMPEVAS QQNFVPYELA 300
  301 ELYKQRGTSQ DLKSILPLYM LAASLGHDRS SFLVGEAFFY GTYGARENKL RALQYYHLAN 360
  361 DKGNADAMLA LCKLYLRGLP GHIFPSSRRA FEYAHRAAML GHAPACYVLG KFYETGVGCV 420
  421 KDLAKSEAGF RAGLINDSPI TDADALQIAS TLVLLQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] MSA 1.234997 View MSA. No confident structure predictions are available.
    2 View Details [75..159] PSI-BLAST 7.0 No description for 2j9qA was found.
    3 View Details [160..456] PSI-BLAST 39.69897 Helicobacter cysteine rich protein C (HcpC)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.736853224379565 bayes_pls_golite062009
  • protein binding
    		•  0.328664825514855 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle