YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: vps20

General Information:
Name(s) found: vps20 / SPBC215.14c [Sanger Pombe]
Description(s) found:
SHOW ONLY BEST
  • pir||T39904 probable vacuolar protein sorting protein subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582854|sp|O94318.1|VPS20_SCHPO RecName: Full=Vacuolar protein sorting-associated protein 20 [NCBI NR]
  • gi|3873551|emb|CAA22128.1| vacuolar sorting protein Vps20 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113483|ref|NP_596691.1| vacuolar sorting protein Vps20 [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • vacuolar sorting protein Vps20 [Sanger Pombe]
  • Vacuolar protein sorting-associated protein 20 OS=Schizosaccharomyces pombe GN=vps20 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; SIMILAR TO S. CEREVISIAE YMR077C; PREDICTED COILED-COIL: O94318; [pompepVF.fasta]
  • Hypothetical coiled-coil protein [pompep4896]
  • |||putative vacuolar protein sorting protein [pompepnew.fasta]
  • SPBC215.14c protein [4896.FASTAC]
  • |||involved in intracellular protein transport (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical coiled-coil protein [Schizosaccharomyces pombe]gi|3873551|emb|CAA22128.1| SPBC215.14c [Schizosaccharomyces pombe]gi|7493158|pir||T39904 probable vacuolar protein sorting protein subunit - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||involved in intracellular protein transport |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O94318) Hypothetical coiled-coil protein [pompep4896_normal_reversed]
  • |vps20||SNF7 family class E vps |Schizosaccharomyces pombe|chr 2|||Manual [pombe030305.revfasta]
  • |vps20||vacuolar sorting protein Vps20|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBC215.14c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC215.14c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |vps20||ESCRT III complex subunit Vps20|Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Vacuolar protein sorting-associated protein 20 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vps20 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 226 amino acids

    Gene Ontology:
    Cellular Component: ESCRT III complex [ISSLink to PubMed article]
    cell cortex [IDALink to PubMed article]
    extrinsic to membrane [IEA]
    Biological Process: protein targeting to vacuole during ubiquitin-dependent protein catabolic process via the MVB pathway [IMPLink to PubMed article]
    late endosome to vacuole transport [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVNSSKIND KDRSILSIKE QRDKLLRYSK RLEKIEQLEI DIARKCLRDS DKRGALRALK  60
   61 AKKLYSGLIT QTYGQLGNIE QLLSTIEFTL IQKDVMFGLQ EGTNLIRQLQ ADMPLERVGR 120
  121 ICNDRDEAMS YVDEVNDMLQ GRMSRDQEDE IQEELDSLIR EQEDEKVKDL EKPGFTPSTG 180
  181 VDVLPSVPLK NAIPSLDESF PKAASVSNTS SAVVIDEELR KDPVLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..226] PSI-BLAST 20.522879 No description for 2gd5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle