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Protein Overview: SPBC83.08

General Information:
Name(s) found: SPBC83.08 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • AAA family ATPase Rvb2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 465 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    ASTRA complex [IDALink to PubMed article]
    Swr1 complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Ino80 complex [IDALink to PubMed article]
    Biological Process: chromatin remodeling [IPILink to PubMed article]
    histone exchange [IPILink to PubMed article]
    Molecular Function: ATPase activity [ISSLink to PubMed article]
    ATP binding [IEA]
    DNA helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSISVTSHND VSKLERIGAH SHIKGIGLND NLEPKESSQG MVGQVKARRA AGVILKMIQE  60
   61 GRIAGRAILM AGPPSTGKTA IAMGMAQSLG SDTPFVTLSA SEVYSLEMSK TEALLQALRK 120
  121 SIGVRIKEET EIIEGEVVEV QIDRSITGGN KQGKLTIRST DMETVYDLGT KMIDSLTKEK 180
  181 VLAGDVISID KSVGRVTKLG RSFSRARDYD AMGADTRFVQ CPQGEIQKRK EVVHTVSLHD 240
  241 IDVINSRTQG FLALFSGDTG EIKPEVREQI NTKVSEWREE GKAEIVPGVL FVDEVHMLDI 300
  301 ECFSFFNRAL EDDLAPIVIM ASNRGITRIR GTNYRSPHGI PVDLLDRMLI ISTLPYSHEE 360
  361 VKEILKIRCQ EEDVDMEPSA LDYLSTIGQE TSLRYALLLI SSSNQVALKR KSATIEESDI 420
  421 RRVYELFLDQ KRSVEYLEEY GKNYITENEW SASGAQDNAV AMQED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..465] PSI-BLAST 57.30103 No description for 2c9oA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle