General Information: |
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Name(s) found: |
clr1 /
SPBC2D10.17
[Sanger Pombe]
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Description(s) found:
SHOW ONLY BEST |
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Organism: | Schizosaccharomyces pombe |
Length: | 1238 amino acids |
Gene Ontology: |
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Cellular Component: |
mating-type region heterochromatin
[IDA]
nucleus [IDA] telomeric heterochromatin [IDA] NuRD complex [IDA] rDNA heterochromatin [IDA] centromeric heterochromatin [IDA] |
Biological Process: |
negative regulation of transcription from RNA polymerase II promoter
[IMP]
chromatin modification [IEA] chromatin silencing at centromere [IMP] chromatin silencing at rDNA [IMP] chromatin silencing [IMP] chromatin silencing at silent mating-type cassette [IMP] |
Molecular Function: |
zinc ion binding
[IEA]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MAEPDISSSE TLTELQQLRL LYFFCFYHAA PFNVKTLVHS LIPPGALSYL LSTYDILRPW 60 61 LMALRVREGP VNDISTIVQL YEEIVKTGFF INPPPFESYS QTLVARITTL GRPKLQVQQE 120 121 AQSEVYQRAS TNTQQQVSNV SHGNFKPNSS VNTEPNTSIL SNSKYAGIKP FDFQSSSQNP 180 181 GLVCEQKTFY QHQFRPFSNL PSNKSSPVKH VSPNVKNNSK KTASSVNSNH SSIPSSITKS 240 241 NISSLDVYGS EKLISSGSQQ PGHGMVQTTS DKVNASASLY DRSPSKKDIT SSRNTSSYNL 300 301 GSMRNPSTLK NAAHANPFEG LRFQGSSAVL KEGLNSTVKK TFFDNLNSEK VCPSVSPFLT 360 361 PDNIASSILY STASFSRSKP DRPRLNLSLE LKLMQNELNK GQLKKQFKGD LRNLADWNNL 420 421 SLVSSKFPSL PITNLRPDGS FLKHRRFNEE IAYNRQTLEK AIKQLDLSPD KVIQLREQNG 480 481 VAVNGRVCYP TRNKHSEISA QSSSSLGVTK SLASEVYSSS TVDTISKLNT DKDNYLIKSK 540 541 KEPIQQKSVS SETTLVKPSS TSSYIDTTNN VLKTNSSFKS SGLTSGPRNE KELLPEGIPT 600 601 SHNNSETQAQ TADVSNIAAS ADGIYNSDQE KPPEKLDVTK RAFGREIENS NEKELLTSTF 660 661 LSPSAESQVC LAEIKTIRPG LVPKKQFSVD QNNVISDNTD CSLPKPSNSK LSSISSDGDA 720 721 SSNRMAVPDK SPFVHAAPNS KALTKDSFST HISVSSLLHS DNEISPIDST RKDYFTSKDS 780 781 NLQTLKEDAS STKQAKDSGT NDFDKLISGN DVSKNNSGEE QSRSALKPLI SGKLSSCESI 840 841 NLTKDISTVK RKEYFGIEST SSKQPFHDTG SIKIPAKRSF DTIDKDFRSS NIPFADKIKE 900 901 DGGDKNVISS IHITTELPKS MPVEVPTNAG AQSDQSNVVD SESLNLRENI STSVADVSLS 960 961 QAGNEAVLSK KACKPLVLID PFEEKVLKAF NMLSKGYAEY RCQWEGCLAN LHSLENFIKH1020 1021 VLLLHHPKSC SVVKCLWASC DMVLPSEEFE MHLRGHLNNI RLNCEVSNCK KCFSNYEDMF1080 1081 KHLQHSHLPF KFTPESFIKI RNGNVKEEAR RTRNAYTQKS GEVECFMETC TPIAKPAPAN1140 1141 WYPVPPPGFN SSLLSRLTQS NQSKDKIIAA LAKRNVYKSF AGLYDSKGKN DNTGYDFDSN1200 1201 YARVGRHGSF ILPVSKSVPT PSLLIEGSIV QRKNIKIE |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..111] | N/A | No confident structure predictions are available. | |
2 | View Details | [112..192] | N/A | No confident structure predictions are available. | |
3 | View Details | [193..293] | N/A | Confident ab initio structure predictions are available. | |
4 | View Details | [294..352] | N/A | No confident structure predictions are available. | |
5 | View Details | [353..595] | N/A | No confident structure predictions are available. | |
6 | View Details | [596..701] | 1.08 | Solution structure of the Kruppel-associated box (KRAB) domain | |
7 | View Details | [702..933] | N/A | No confident structure predictions are available. | |
8 | View Details | [934..1238] | 1.46 | No description for 2i13A was found. |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||
1 | No functions predicted. | |||||||||||||||
2 | No functions predicted. | |||||||||||||||
3 | No functions predicted. | |||||||||||||||
4 | No functions predicted. | |||||||||||||||
5 | No functions predicted. | |||||||||||||||
6 |
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7 | No functions predicted. | |||||||||||||||
8 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.89 |
Source: Reynolds et al. (2008)