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Protein Overview: SPCC594.06c

General Information:
Name(s) found: SPCC594.06c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • SNARE Vam7 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 341 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole membrane [ISSLink to PubMed article]
    fungal-type vacuole [IDALink to PubMed article]
    Biological Process: vesicle fusion [ISSLink to PubMed article]
    meiosis [IEPLink to PubMed article][IMPLink to PubMed article]
    Golgi to vacuole transport [ISSLink to PubMed article]
    Molecular Function: phosphoinositide binding [ISSLink to PubMed article]
    SNAP receptor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKIKIPET SQSSDEYSRW TVYHIEVAFP NGGKHVVFRR FNEFVALDAQ IRPNDYNSRL  60
   61 CKLPSKSWVS STVTNEKLRE SRRLALQAYV QCLSETPWIK MPVVKKFLNI KDESEDETQG 120
  121 QFLGPTDWIQ VFQDCKRNLH MYRVDLMSGK SITIGVQTKN VYAIKSLMDN LSESLDKLEL 180
  181 ANALGPGEIL RRKDMLEQLG SEFLSFKRLV KNANSPVAPP SASSQLNSSN PSSPFRPLSA 240
  241 STDKQSNTSL NRVLGKNRMP ETQTTKKLDN VGLYNMQNQT MEDQDMQAES LLPIIQRQKE 300
  301 LSKMINQEVV EQNSMLDELS NEAYANQKKL HRTRAGLRKL G

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] PSI-BLAST 17.522879 No description for 2dybA was found.
    2 View Details [213..341] PSI-BLAST 5.0 Syntaxin 1A N-terminal domain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle