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Protein Overview: SPBC4C3.07

General Information:
Name(s) found: SPBC4C3.07 [Sanger Pombe]
Description(s) found:
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  • pir||T40490 probable 26s proteasome regulatory subunit - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626718|sp|O43060.1|EIF3F_SCHPO RecName: Full=Eukaryotic translation initiation factor 3 subunit F; Short=eIF3f [NCBI NR]
  • gi|2832888|emb|CAA16829.1| translation initiation factor eIF3f [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113090|ref|NP_596298.1| translation initiation factor eIF3f [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • translation initiation factor eIF3f [Sanger Pombe]
  • Eukaryotic translation initiation factor 3 subunit F OS=Schizosaccharomyces pombe GN=eif3f PE=1 SV=1 [Swiss-Prot]
  • MOV34 DOMAIN PROTEIN; PUTATIVE COP9/SIGNALOSOME COMPLEX SUBUNIT 6; NO APPARENT S. CEREVISIAE ORTHOLOG: O43060; [pompepVF.fasta]
  • MOV34 DOMAIN PROTEIN; POSSIBLE COP9/SIGNALOSOME COMPLEX SUBUNIT 6: O43060; [pompepV13]
  • Putative COP9/signalosome complex subunit 6 [pompep4896]
  • |||MOV34 domain [pompepnew.fasta]
  • SPBC4C3.07 protein [4896.FASTAC]
  • |||COP9/signalosome complex (subunit 6) (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative 26s proteasome regulatory subunit [Schizosaccharomyces pombe]gi|2832888|emb|CAA16829.1| SPBC4C3.07 [Schizosaccharomyces pombe]gi|7492329|pir||T40490 probable 26s proteasome regulatory subunit - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||eukaryotic translation initiation factor eIF3f |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O43060) Putative COP9/signalosome complex subunit 6 [pompep4896_normal_reversed]
  • |||translation initiation factor eIF3f|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC4C3.07 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC4C3.07 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Eukaryotic translation initiation factor 3 subunit F OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=eif3f PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 302 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    eukaryotic 43S preinitiation complex [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    eukaryotic translation initiation factor 3 complex [IDALink to PubMed articleLink to PubMed article]
    Biological Process: positive regulation of translational initiation [ICLink to PubMed article]
    translational initiation [IMPLink to PubMed article]
    Molecular Function: translation initiation factor activity [ICLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGTKHVLH LTKPSSRSSP LNIVIEPAVL FSILDHSTRK SENNQRVIGT LLGTRSEDGR  60
   61 EIEIKSCFAV PHNESSEQVE VEMEYHRAMY HLHLKANPRE VVVGWYATSP DLDAFSALIQ 120
  121 NLYASPAEPG TAPLGTYPHP CVHLTVNTDV SSPLAIKTYV SSPVGITERL ADSCAFVPTP 180
  181 FTIRDDEAVR SGLKAVAAPK NDPSRLASLF TDLQQLRRST LELLSMIERV SDYVQNVIDG 240
  241 SSPANVAVGR YLMKCFSLIP CVEGQDFEKI FSSHLQDVLV VVYLANTLRT QVDIASRLNL 300
  301 LP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..239] PSI-BLAST 42.0 No description for 2o95A was found.
    2 View Details [240..302] MSA 2.102992 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle