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Protein Overview: mug87

General Information:
Name(s) found: mug87 / SPCC1620.11 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • nucleoporin Nic96 homolog [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 851 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    nuclear pore [ISSLink to PubMed article]
    Biological Process: nucleocytoplasmic transport [ISSLink to PubMed article]
    poly(A)+ mRNA export from nucleus [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVASDDSPK EARGIPFLDQ KSRKLANELL EPCLPFIQFN LGEIEQRAKH YLNTVPTSKD  60
   61 GNTKAHYLLA GSGINAEQTW KKIESLSLQV RPPTTLELSF TDVDMFLKYH REKNVLNSLE 120
  121 ALVQNTQIAF DQYLEEEWRS KAAKSRPSFD NILLENKKRV SFYPFSVQRS QKFASTLKMC 180
  181 LEEEALHGFQ SKLVSSFCEV AREFAHDTKS LLLYESWKLL SSVILDKDSV TVFGNKGIIS 240
  241 KAFDIETEDG SVNSRFYQRI SDCSRKFLEA QFFEVLNKEI AKTPQAALVG GVPSIRNKIR 300
  301 AYLNIRLLRN GVWINPDLEI IQDVPIWAFI FYLLRCGFLK EAVDFTEENR DLFEKVAEKF 360
  361 PFYINAYAKA PNGILPRQLR SQLFSEFNQT IRLQESSDPY KYAVYKIIGR CDLSKTSCPS 420
  421 ICSVTEDYIW FQLILSREFT EKSVSAHEFF SLEDVQHILL SYGSDYFTNN GSNPVMYFFL 480
  481 LMLCGLYERA INFLYPYFPT DAVHFAITCA YYGLLRTAPS SSVVSNEPGK IQSMLVETKS 540
  541 GKPSLEFDRL LIDYTQTCQE LSPVMSACYL IPMCKIDKYI SMCHKSLCSL VLSTRDYVNL 600
  601 LGDIRGDGER TPSFLENHRS LIGLSSVKEY LSKITLTAAK QADDQGLLSD AILLYHLAED 660
  661 YDAAVTVINR RLGSALLRFL DQFVFPDKLI SLTKSMMDVY NRNPSLYAKV DYKNRETTNL 720
  721 LLLTVEAFNA YTNKDYEQAL SSLQQLEILP LDPLDSDCET FVVRKLAKEF RFLNENLLQN 780
  781 VPGIVLIAMN SLKELYAKQK SSSFGNDAIS VDKLRLYRQK ARRIVMYSFL IEYRMPSQIL 840
  841 EQLNRCEIEM T

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..127] MSA 2.036995 View MSA. No confident structure predictions are available.
    2 View Details [128..851] PSI-BLAST 1000.0 No description for 2qx5A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle