YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC3B9.01

General Information:
Name(s) found: SPBC3B9.01 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • Hsp70 nucleotide exchange factor [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 287 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: regulation of catalytic activity [ICLink to PubMed article]
    translation [ISSLink to PubMed article]
    Molecular Function: adenyl-nucleotide exchange factor activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLLAFSTQ LQAQGNSSNS PPDPKDLDPS VLDHIFGANP ADEMRKAMDA IEDPSVPLDQ  60
   61 KEIAFDNLEM LVEHIDNANN LVPLQLWPRL LKQLESPEST LRRLAAWTIA TAVQNNPKSQ 120
  121 QALIENDGLK ILFGALKKED SDETKNKVLY AITSELKLNE AGIALLDKIP NSWEMLIEIL 180
  181 ELKHSVMTKR VIFFFYALLI QEDKSKQIIL QKAHEFQIPE KVYQFSLEHS VDEDCVTKSL 240
  241 HTLYLFQKNK VSVANTNELL KSLVQFKSEF PEIFTVDEWK AFHEALE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] PSI-BLAST 55.0 Mouse Importin alpha- phosphorylated SV40 CN peptide complex

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.47395644967726 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.72695422276859 bayes_pls_golite062009
  • protein binding
    		•  1.04044934052933 bayes_pls_golite062009
  • translation regulator activity
    		•  0.82193201542158 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.821718728559452 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.803700928110921 bayes_pls_golite062009
  • DNA binding
    		•  0.797151158461249 bayes_pls_golite062009
  • translation initiation factor activity
    		•  0.52296625430866 bayes_pls_golite062009
  • structural molecule activity
    		•  0.444796267478425 bayes_pls_golite062009
  • RNA binding
    		•  0.40024158562931 bayes_pls_golite062009
  • transcription factor activity
    		•  0.123371336741999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle