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Protein Overview: SPBC21B10.08c

General Information:
Name(s) found: SPBC21B10.08c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • sequence orphan [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 198 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFPASTHVY IAKIIGKKGE GDKILDLLSK VNEHVLKSEP FTKTYYFARD AKNPDYIFGL  60
   61 ELYDSKEVLE NSHKTSNPFL AFANYLTSTH APLAEPLQLL NFKVVDGHLD KDNLGPDAKD 120
  121 YVLYTEYTGD SATLKQQLTV NPKADTSLII HSLDDPSLYA VVTRYSKSGI EPGPAEISGA 180
  181 TSVSQQVIYS GVGFLNRP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run dam1 No Comments Liu X, et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] FFAS03 1.25 Hypothetical protein SO0527
    2 View Details [115..198] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle