YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: SPBC21B10.08c
Organism: Schizosaccharomyces pombe
Length: 198 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

No multiple sequence alignment data found for SPBC21B10.08c.

Predicted Domain #1
Region A:
Residues: [1-114]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFPASTHVY IAKIIGKKGE GDKILDLLSK VNEHVLKSEP FTKTYYFARD AKNPDYIFGL  60
   61 ELYDSKEVLE NSHKTSNPFL AFANYLTSTH APLAEPLQLL NFKVVDGHLD KDNL

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.25
Match: 2bbeA
Description: Hypothetical protein SO0527
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [115-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GPDAKDYVLY TEYTGDSATL KQQLTVNPKA DTSLIIHSLD DPSLYAVVTR YSKSGIEPGP  60
   61 AEISGATSVS QQVIYSGVGF LNRP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle