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Protein Overview: SPBPB7E8.02

General Information:
Name(s) found: SPBPB7E8.02 [Sanger Pombe]
Description(s) found:
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  • gi|74623693|sp|Q9C0V4.1|YOM2_SCHPO RecName: Full=Uncharacterized protein PB7E8.02 [NCBI NR]
  • gi|19113247|ref|NP_596455.1| conserved protein (fungal bacterial protazoan) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|13624771|emb|CAC36932.1| PSP1 family protein [Schizosaccharomyces pombe] [NCBI NR]
  • PSP1 family protein [Sanger Pombe]
  • Uncharacterized protein PB7E8.02 OS=Schizosaccharomyces pombe GN=SPBPB7E8.02 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE RNA POL II SPECIFIC SUBUNIT C82/HRPC62: ;N0ACC; [pompepVF.fasta]
  • Putative RNA pol II specific subunit C82/hRPC62 [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPBPB7E8.02 protein [4896.FASTAC]
  • |||hypothetical protein|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative RNA pol II specific subunit C82/hRPC62 [Schizosaccharomyces pombe]gi|13624771|emb|CAC36932.1| SPBPB7E8.02 [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • |||conserved protein |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (Q9C0V4) Putative RNA pol II specific subunit C82/hRPC62 [pompep4896_normal_reversed]
  • |||PSP1 family protein|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPBPB7E8.02 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBPB7E8.02 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Uncharacterized protein PB7E8.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBPB7E8.02 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 749 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [ISSLink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTVVGETEL NRLNNGLSSN NGSSADEGLE HWNPLKKIHS ADSSRRRSTS SQLNQPSNYH  60
   61 MHSSLHEEVS VGSSIASPSS RIPDKAISQY YETSPPSSTS SLSSNNQLMN SSVILSPGQF 120
  121 LPDDANAYGP KASLPPSEMP SHFHPLWSKS ASKDSNAFND PSAIPNPSPL FSSAYATRIN 180
  181 GSLRNDKWNR SSFSEALSSS RFSRPQVGQQ QPLSSAFPFQ PVKQPTEQPG SLHPFMQESK 240
  241 TSPFATRRPS LNTDHHGRPI LLSPLNYQNS SLNPSTPSPF GGSPVMHPPV SNLSPRTPAV 300
  301 PMSSDGHLAP AFDFLNENPI WSKRFSISSI KYSAPSTSNA SNIAPDSAPP ASSQFSVPFN 360
  361 AAAENINDTP DSVLANSPTP RHLPYTWSRH STSGPSRSTV LNPSTSRMSN YTGLESHLAQ 420
  421 LSFKRRSNSA TLPSLGSIRP FPISEHSPNI NPLDEAAVED EVKEEKSRFH LGHRRSSTAD 480
  481 NGTLSSNVPL YPAYNSSPVQ TRTSLFSSRL SKPSNPIVSS VSQANAPKNA LHSMPSPTSL 540
  541 ANLPSNLSDT QYKKLYNLYL VEFKAGRADV FYIDDNIKLS LNLNDYVVVD ADRGQDLGRL 600
  601 IAQNLSQSEV ASHIEKIPSD RNGQLQNLDG AILEGDTSQS LHPKRILRKA QPHEVDQLIQ 660
  661 KTQDEAQALL VCQAKVRQRK LPMEVLDGEY QWDRKKLTFY YHAKQRIDFR ELVRDLFKVY 720
  721 KTRIWMCAVS GTNMSSPASI NASTNQFVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..179] MSA 2.209996 View MSA. No confident structure predictions are available.
    2 View Details [180..349] MSA 4.224987 View MSA. No confident structure predictions are available.
    3 View Details [350..417] deduced N/A No confident structure predictions are available.
    4 View Details [418..541] MSA 5.191988 View MSA. No confident structure predictions are available.
    5 View Details [542..626] deduced N/A No confident structure predictions are available.
    6 View Details [627..749] Pfam 50.148742 No description for PF04468.3 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle