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Protein Overview: SPBC1711.05

General Information:
Name(s) found: SPBC1711.05 [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • nucleocytoplasmic transport chaperone Srp40 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 451 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: nucleocytoplasmic transport [ISSLink to PubMed article]
    protein targeting [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGEISMKSKV CPLIYHFLQE NGYVKTAQTF LKETGDKDLA KGKVKKNLLD LLSQKEFLPY  60
   61 LTTEDVGKHK KTKESLEKSN DDSQKISKKG APPEKAHSSS EASGSGSSSD ESDSSSSESE 120
  121 SSSEDNDSSS SSSDSESESS SEDSDSSSSS SDSESESSSE GSDSSSSSSS SESESSSEDN 180
  181 DSSSSSSDSE SESSSEDSDS SSSSSDSESE SSSEGSDSSS SSSSSESESS SEDNDSSSSS 240
  241 SDSESESSSE DSDSSSSSSD SESESSSKDS DSSSNSSDSE DDSSSDSSDS ESESSSEDSD 300
  301 STSSSSDSDS SSSSEDGNSN TDTTTSGEVS AQSSTNSTSS EESTSVKDED SSKIHDKSLK 360
  361 RKHEDDESST STKSSRTTKT PFTRVGDPSQ WDFASPALRD NSFNFEDDYG TLANRDLIVT 420
  421 RGKGFRQEKN KKKRGSYRGG RINTEVRSFK F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..265] MSA 2.273995 View MSA. No confident structure predictions are available.
    2 View Details [266..371] deduced N/A No confident structure predictions are available.
    3 View Details [372..451] Pfam 57.568636 No description for PF05022.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle