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Protein Overview: tas3

General Information:
Name(s) found: tas3 / SPBC83.03c [Sanger Pombe]
Description(s) found:
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  • pir||T40692 hypothetical protein SPBC83.03c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74582973|sp|O94687.1|TAS3_SCHPO RecName: Full=RNA-induced transcriptional silencing complex protein tas3; Short=RITS protein tas3 [NCBI NR]
  • gi|4455776|emb|CAB36865.1| RITS complex subunit 3 [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112427|ref|NP_595635.1| RITS complex subunit 3 (PMID 14704433) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • RITS complex subunit 3 [Sanger Pombe]
  • RNA-induced transcriptional silencing complex protein tas3 OS=Schizosaccharomyces pombe GN=tas3 PE=1 SV=1 [Swiss-Prot]
  • HYPOTHETICAL SERINE-RICH PROTEIN; SEQUENCE ORPHAN: O94687; [pompepVF.fasta]
  • Hypothetical serine-rich protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • SPBC83.03c protein [4896.FASTAC]
  • |tas3||RITS complex (PMID 14704433)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical serine-rich protein [Schizosaccharomyces pombe]gi|4455776|emb|CAB36865.1| SPBC83.03c [Schizosaccharomyces pombe]gi|7491737|pir||T40692 hypothetical protein SPBC83.03c - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |tas3||RITS complex |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O94687) Hypothetical serine-rich protein [pompep4896_normal_reversed]
  • |tas3||RITS complex subunit 3|Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC83.03c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC83.03c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • RNA-induced transcriptional silencing complex protein tas3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=tas3 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 549 amino acids

    Gene Ontology:
    Cellular Component: mating-type region heterochromatin [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    nuclear telomeric heterochromatin [IDALink to PubMed article]
    RITS complex [IDALink to PubMed article]
    spindle pole body [IDALink to PubMed article]
    centromeric heterochromatin [IDALink to PubMed article]
    Biological Process: regulation of histone methylation [IMPLink to PubMed article]
    meiotic chromosome segregation [IMPLink to PubMed article]
    regulation of chromatin silencing at centromere [IMPLink to PubMed article]
    chromatin silencing at silent mating-type cassette [IGILink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    chromatin silencing by small RNA [IMPLink to PubMed article]
    Molecular Function: protein binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKGIKKYLP SLPFLACISD FPENHGTSRR SATVSLERVH ELFTEHWLSN LKNRREKRQE  60
   61 LAEEAVYCRS EMLSQRKLLA AVDFPQQLKN SPAKAKATHT SSGVTKEVRA SKKYTSSNVE 120
  121 FPLVTDGKEK PVKSKQLRKN SVTEFEKPIE TKKSKHRKSR NKFLDKSSGS MEIESWDNST 180
  181 SDSIIESSSR LHESISLREN DIRSSDSKSV GWDDNSTGFR ESSKSLDHTD TSMFMELDSN 240
  241 SDPQFRPKYQ AKSSWFAPDD PEASWGNLDD GWGETNGSWS STDDTKHYKN EWAESINLDN 300
  301 FNRPSQQEDY DKPKNTQVSR SSNHHRRYDS YHPDSRSDSY RSKREHYDNR DTGPRSKHLE 360
  361 KSSYVYNQNF EDRTHLSDHG AHFHLGNAND FNMQGSSRKR KASDRQRESR ENELPTKKLN 420
  421 ASDSHNPLAS LTTDKNDLYI NWLKSLSFFQ TNSSCAEALV KVIPHYHNKL IDFSQVLQLV 480
  481 FSASEKFPIQ ENQPLPEQLM FLSNLEKQTP FAKAVGSSIY KLVTGKNLSL DFASQILKEA 540
  541 SILEHKNEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..259] deduced N/A No confident structure predictions are available.
    2 View Details [260..426] deduced N/A No confident structure predictions are available.
    3 View Details [427..549] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle