Protein Overview: swd3

General Information:
Name(s) found:	swd3 / SPBC354.03 [Sanger Pombe]
Description(s) found: SHOW ONLY BEST	pir\|\|T40283 beta-transducin - fission yeast (Schizosaccharomyces pombe) [NCBI NR] gi\|74675992\|sp\|O43017.1\|SWD3_SCHPO RecName: Full=Set1 complex component swd3; Short=Set1C component swd3; AltName: Full=COMPASS component swd3; AltName: Full=Complex proteins associated with set1 protein swd3 [NCBI NR] gi\|2950453\|emb\|CAA17803.1\| WD repeat protein Swd3 [Schizosaccharomyces pombe] [NCBI NR] gi\|19112019\|ref\|NP_595227.1\| WD repeat protein Swd3 [Schizosaccharomyces pombe] [NCBI NR] WD repeat protein Swd3 [Sanger Pombe] Set1 complex component swd3 OS=Schizosaccharomyces pombe GN=swd3 PE=1 SV=1 [Swiss-Prot] WD REPEAT PROTEIN: O43017; [pompepVF.fasta] WD repeat protein [pompep4896] \|swd3\|\|SET1 complex (TAP) (PMID 12488447) [pompepnew.fasta] Swd3 protein (Spbc354.03 protein) [4896.FASTAC] \|swd3\|\|SET1 complex (TAP) (PMID 12488447)\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [pombe041504.fasta] WD repeat protein [Schizosaccharomyces pombe]gi\|2950453\|emb\|CAA17803.1\| SPBC354.03 [Schizosaccharomyces pombe]gi\|7490155\|pir\|\|T40283 beta-transducin - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas] \|swd3\|\|WD repeat protein\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [pompep2242005.fasta] (O43017) WD repeat protein [pompep4896_normal_reversed] \|swd3\|\|WD repeat protein Swd3\|Schizosaccharomyces pombe\|chr 2\|\|\|Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta] SPBC354.03 [Schizosaccharomyces pombe] [nr-271106-contam.fasta] Set1 complex component swd3 (Set1C component swd3) (COMPASS component swd3) (Complex proteins associated with set1 protein swd3) [nr-271106-contam.fasta] SET1 complex protein [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta] Set1 complex component swd3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=swd3 PE=1 SV=1 [uniprot_sprot.fasta.20160308]
Organism:	Schizosaccharomyces pombe
Length:	380 amino acids
Gene Ontology:
Cellular Component:	Set1C/COMPASS complex [IDA] nucleus [IDA] nuclear chromatin [IC] cytosol [IDA]
Biological Process:	chromatin remodeling [IC] histone H3-K4 methylation [IMP]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTAQQFPL NHDLQVQKDQ KGVVEEDEEQ IHKRIRNYES HSGFSEYCTL FGHEKSVTCV  60
   61 SVSPNKRWIA TSSSDGTIKI WSALTFRLEC TLFGHYRGIS QVKWATGSKY LASASDDKTI 120
  121 RIWDFEKRCS VRCLKGHTNY VSSIDFNPLG TLLVSGSWDE TVRIWNLQDG TCLRMLPAHS 180
  181 EPIISVSISA DGTLCATASY DGMARIWDVL SGQCLKTLVE PINVPLSNLQ FTENRKYLLV 240
  241 SNLNSQIRLW DYRRNRVVRI FDSHVNTRYS MSWDCYSSKN IPKNTEALPN NDSSYPDDAE 300
  301 SFMHDAYLLI PSEDGTIQIT DPSTKIIIDD SIRHSDDPET SLLNVTSLGP FIITSGTDPY 360
  361 VRVWAPSLLL SKHEKDGFSP

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..380]	PSI-BLAST	72.0	No description for 2gnqA was found.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Protein Overview: swd3

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: