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Protein Overview: swd3

General Information:
Name(s) found: swd3 / SPBC354.03 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • WD repeat protein Swd3 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 380 amino acids

    Gene Ontology:
    Cellular Component: Set1C/COMPASS complex [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: chromatin remodeling [ICLink to PubMed article]
    histone H3-K4 methylation [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTAQQFPL NHDLQVQKDQ KGVVEEDEEQ IHKRIRNYES HSGFSEYCTL FGHEKSVTCV  60
   61 SVSPNKRWIA TSSSDGTIKI WSALTFRLEC TLFGHYRGIS QVKWATGSKY LASASDDKTI 120
  121 RIWDFEKRCS VRCLKGHTNY VSSIDFNPLG TLLVSGSWDE TVRIWNLQDG TCLRMLPAHS 180
  181 EPIISVSISA DGTLCATASY DGMARIWDVL SGQCLKTLVE PINVPLSNLQ FTENRKYLLV 240
  241 SNLNSQIRLW DYRRNRVVRI FDSHVNTRYS MSWDCYSSKN IPKNTEALPN NDSSYPDDAE 300
  301 SFMHDAYLLI PSEDGTIQIT DPSTKIIIDD SIRHSDDPET SLLNVTSLGP FIITSGTDPY 360
  361 VRVWAPSLLL SKHEKDGFSP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..380] PSI-BLAST 72.0 No description for 2gnqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle