YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ssr4

General Information:
Name(s) found: ssr4 / SPBP23A10.05 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • SWI/SNF and RSC complex subunit Ssr4 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: SWI/SNF complex [IDALink to PubMed article]
    nucleus [IDALink to PubMed article]
    nuclear chromatin [ICLink to PubMed article]
    cytosol [IDALink to PubMed article]
    RSC complex [IDALink to PubMed article]
    Biological Process: chromatin remodeling [NASLink to PubMed article]
    regulation of gene-specific transcription from RNA polymerase II promoter [ICLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATMAAQSL LSIPVEYRSQ VWCRANLPYP PAPQLPIPAV VDILTKASQA LPQISFSWTL  60
   61 IDQPPDGSLF LVWQAPTLPS PPDGMHFMSN ERFFNMDVAG KVLEIHEAKH GFYPLSETRT 120
  121 MHVRCRYRLL GVGFDNFWLV HYFQGSETDS IPANISVAKP PHLRRYPLPD VKTSPFLLQE 180
  181 PKKHIPEGTA LSQRETLPNM GSAQMKSQSR TPSFSNVTTS PVPPINSNAT AQTAEGHMGA 240
  241 TNMTVDNMNK PSIPPNGNTS ILMQEDLEIE KGDVMDKLSP QQICTARFIK HAEWMSQVLL 300
  301 TLQSVKDIEP PALWQEPNSM EELGKELKDN KEQLVKQDQK YQSLQGDLSY TDSMSNLLKE 360
  361 FSNIKSAEEC DVLQKKIEEF AEAKIVPLSH VTERS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] MSA 1.008975 View MSA. No confident structure predictions are available.
    2 View Details [115..395] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle