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Protein Overview: chr2

General Information:
Name(s) found: chr2 / SPCC417.05c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • chitin synthase regulatory factor Chr2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 512 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cell division site [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    anchored to plasma membrane [RCA]
    Biological Process: fungal-type cell wall polysaccharide biosynthetic process [TASLink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVSNGGTGS AHEWDRTTID YDIEPSSDTH AIEISSNDDY LHPLAQFKKS EEFDEVPTNT  60
   61 LIHEVPSFSD SASNIQSQRN LSPFKELEIV SKKKSEQTFS SAVDFSAINV KNLNLKSGLF 120
  121 DPEPPSYDPD YAFNQRSLQS DPGSDEMFRN FKKSISLEEL KSSYKLASAE MCEPETRLSF 180
  181 LQLALQAEKS SSRRNREYVA RKKEEAFDYL TSFVSQGNSF FGYSEALYLL AVCYGTGALR 240
  241 TEINEKEAYR LYKMAADLNH VQAAYRVAIC LQMGFGVTQN TEEAIHYFFR AASGQHVGAM 300
  301 HRMALIYFRG LMSVKRDPVK AMYYLNLGAL EADHEFPQAL YDLAELYEHG SSYLDGLLEL 360
  361 SPRKAFVLYH IAAKYGLKDA QLRVARCFEL GQLECDINLV RSFVWYRRLA RKRNPEAMWK 420
  421 LSQFYLNGVD DVIYPNPELA NEWAKAAAYK NHHLASTFVQ DVGKEDVFEK TSITISNEER 480
  481 KSRNSESLPK KKKRLSMLSF KRSKNRESCI IS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] deduced N/A No confident structure predictions are available.
    2 View Details [121..258] PSI-BLAST 3.221849 No description for 2fi7A was found.
    3 View Details [259..512] PSI-BLAST 37.045757 Helicobacter cysteine rich protein C (HcpC)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  1.37674270036607 bayes_pls_golite062009
  • protein binding
    		•  0.328664825514855 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle