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Protein Overview: SPCC613.07

General Information:
Name(s) found: SPCC613.07 [Sanger Pombe]
Description(s) found:
Found 20 descriptions.
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  • zf-HIT [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 345 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    Biological Process: snoRNA metabolic process [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSENRLGICS TCQKNASKYR CPRCDSRFCC LECNLEHKRL TKCSGERDPA TFVPKSKLVN  60
   61 HLNSDFNFLS GVERLINRKE NGSHQVSNRA ERNRLQLKRS LERAGINIKF APPSNKKRRL 120
  121 NRTHYDKKSH LIKWSIEWCL HESSTSKDLT DEASENTIIT HSHPESEPLE KIFRKLVEEN 180
  181 SEMNSQVSKA NIHAPDDMQF MIKSRKSRSK GFIYKKIEPS NSLSSCLRNS FVFEVPTIHV 240
  241 FTSTTQVHTE SSYETSSSEQ SDDSSSSSSC ISDSEESSSD DELNELSNEK KANSPTQNVD 300
  301 TSSKLSSVKF QNEDDEDRRK NSDGSEASYS LPPLFGSYFQ KQGQY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..53] MSA 32.095997 View MSA. No confident structure predictions are available.
    2 View Details [54..119] MSA 1.066995 View MSA. No confident structure predictions are available.
    3 View Details [120..254] MSA 3.04899 View MSA. No confident structure predictions are available.
    4 View Details [255..345] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle