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Protein Overview: SPBC23G7.10c

General Information:
Name(s) found: SPBC23G7.10c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • NADH-dependent flavin oxidoreductase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: generation of precursor metabolites and energy [RCALink to PubMed article]
    cellular response to stress [IEPLink to PubMed article]
    Molecular Function: FMN binding [IEA]
    NADPH dehydrogenase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIVNEGAEN VGYFTPAQKI PAGAAIGVPQ TKLFTPLKIR GVEFHNRMFV SPMCTYSADQ  60
   61 EGHLTDFHLV HLGAMGMRGP GLVMVEATAV SPEGRISPND SGLWMESQMK PLRRIVEFAH 120
  121 SQNQKIGIQL AHAGRKASTT APYRGYTVAT EAQGGWENDV YGPNEDRWDE NHAQPHKLTE 180
  181 KQYDELVDKF VVAAKRAVEI GFDVIEIHGA HGYLISSTVS PATNDRNDKY GGTFEKRILF 240
  241 PMEVVHSVRK AIPDSMPLFY RVTATDWLPK GQGWEIEDTV ALAARLRDGG VDLIDVSSGG 300
  301 NHKDQRIEVK DCYQVPFAEK IKDQVNGILL GAVGMIRDGL TANEILESGK ADVTFVAREF 360
  361 LRNPSLVLDS ANQLGENVAW PVQYDYAVKG HRKLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..395] PSI-BLAST 90.09691 Crystal structure of oxidized YqjM from Bacillus subtilis

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.94749091175302 bayes_pls_golite062009
  • binding
    		•  1.2785695107981 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  0.688760510551923 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.399944118589576 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle