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Protein Overview: SPAC25H1.08c

General Information:
Name(s) found: SPAC25H1.08c [Sanger Pombe]
Description(s) found:
Found 17 descriptions.
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  • ribosome biogenesis protein Sqt1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 399 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosolic ribosome [ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    protein complex [RCALink to PubMed article]
    Biological Process: ribosomal large subunit assembly [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEEENQEL YIAENEVEEV IKDNDKLMDQ GVTEDEAEQE QNDTMNNMVM DMSVQGFFEH  60
   61 KDSVFSVSIN PVHSNLCASG GGDDLGYIWD ITTGEQICQL TGHKDSIVAI DWSFDGTYIA 120
  121 TGGMDSQVRL WKSSTGFEFI TAFETVDEIV WLSWHPKGLF LAAGCNDGSI WMWSLPSGKV 180
  181 VQVMYGHTAP VNAGKFIPPG VGKRLATVDD SGTLIVWNPA TGAPECRMSS DDHRFDPGNE 240
  241 ETAAGWTSFD CNAEGNVLFL GGSSGKVKVV NINSSHILAS LEAQTESVEA IALCTALPIC 300
  301 ACASVDGTVA LYDSASLKFR KSLPHEQAVI DCKFLPNTPY LLTACADCVI RKWDVRSGQL 360
  361 LGEYTGHQEP ILCMAITPDG KRVVTGSDDT ELLVFDCEH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..399] PSI-BLAST 61.69897 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle