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Protein Overview: SPBC1677.03c

General Information:
Name(s) found: SPBC1677.03c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • threonine ammonia-lyase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 600 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    mitochondrion [ISSLink to PubMed article]
    Biological Process: isoleucine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: pyridoxal phosphate binding [IEA]
    L-threonine ammonia-lyase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGTSFYTSV LRLGRLAQQG LKFQSVKHIR PSCFSSFGLQ AKRWNSTQQN DSSIDCLEPK  60
   61 LQGIIEDNIS PSTAQKEISD IKFNIPKEML LPDGTPDYLR LTLTSNVYEV IKETPLTKGV 120
  121 VISESTGVPV YLKREDLTPV FSFKIRGAHN KMASLDKQSL KNGVIACSAG NHAQGVAYSA 180
  181 RTLGVKATIV MPQNTPEIKW RNVKRLGANV LLHGANFDIA KAECARLAKE QNLEVIHPFD 240
  241 DPYVIAGQGT IGLEILHQID LRKLDAIYCA VGGGGLIAGI ATYVKRIAPH VKVIGVETFD 300
  301 ADALKKSLKD KKRVTLKEVG LFADGTAVKL VGEETFRLVS KNIDDVVLVD KDEICAAIKD 360
  361 VFLDTRSVVE PSGAMAVAGM KRYVAKHKPK NPNAAQVCIL SGANMDFDRL RFIAERADLG 420
  421 LNKEVFLSVT IPERPGSFEA LHNIITPRSI TEFSYRYDND DYANIYTSFV VKDRATELPL 480
  481 ILQQISEQNM VAEDISDNEL AKTHARYLIG GKSSVSKERL YRLDFPERPG ALCKFLRSIK 540
  541 EVCSISLFHY RNCGGDIASV LAGLRVFDGQ VEKLHSVLEE IGYNWVDETN NPVYLRYLRK 600
  601

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] PSI-BLAST 72.69897 Cystathionine beta-synthase
    2 View Details [95..600] PSI-BLAST 140.0 THREONINE DEAMINASE (BIOSYNTHETIC) FROM E. COLI

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • acetolactate synthase activity
    		•  6.50887202511626 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  5.28856942236052 bayes_pls_golite062009
  • threonine racemase activity
    		•  4.44340924206787 bayes_pls_golite062009
  • threonine synthase activity
    		•  3.59927532963055 bayes_pls_golite062009
  • cysteine synthase activity
    		•  3.57860549303214 bayes_pls_golite062009
  • L-threonine ammonia-lyase activity
    		•  3.33109959091277 bayes_pls_golite062009
  • tryptophan synthase activity
    		•  1.99526226543975 bayes_pls_golite062009
  • lyase activity
    		•  1.87743897464083 bayes_pls_golite062009
  • binding
    		•  1.14906798355281 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.923824749425553 bayes_pls_golite062009
  • catalytic activity
    		•  0.645256181736122 bayes_pls_golite062009
  • ammonia-lyase activity
    		•  0.476674617721478 bayes_pls_golite062009
  • protein binding
    		•  0.341967829237094 bayes_pls_golite062009
  • carbon-nitrogen lyase activity
    		•  0.249761226675912 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.248470717905239 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle