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Protein Overview: SPAC664.08c

General Information:
Name(s) found: SPAC664.08c [Sanger Pombe]
Description(s) found:
Found 21 descriptions.
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  • traub transciption factor family protein [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 452 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleolus [ISSLink to PubMed article]
    Biological Process: ribosome biogenesis [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKVSLKDEL AGMLNPQPQE RDPEALEDAF SDREDSSEEE NDTLGREHYV DVSESKLRSK  60
   61 QAPQLDPKFK GRKTSRQELL NSGSLNSQSS SPSEEEDSEE DENDAVSEDH ENFSSSEASS 120
  121 ISEENEDDDQ SSAIPEKDMD RLKKIINGEK KLSDQIRTSA LEDMKKGLAL KEQMRFYDNV 180
  181 LDTRIRLQKG CSQLLSSSNQ LQGDKVEARD GLVSFIQHTL QLRKNLLIDS GVEILDSRSK 240
  241 RKENPVSLEE IALEMNNLDD SLNEWKNDTL TKWHNRVQAV QGISQSNKFK ALNQSIVQQI 300
  301 ENSMINKKDL VERTRIDYSD PNNKTFNPEI YNDTDFYQSL LKDFINSRMA DSTRDGTVRW 360
  361 MATKKQKQKK ENVDTKASKG RKIRYHVHDK LQNFMAPIEV TVWPDEQTED LFSSLLGQQL 420
  421 DLSETANDTN TSNFVEKDDE LISSNDGFSL FG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..230] MSA 2.114995 View MSA. No confident structure predictions are available.
    2 View Details [231..330] deduced N/A No confident structure predictions are available.
    3 View Details [331..452] Pfam 48.107905 No description for PF08164.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle