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Protein Overview: SPBC887.15c

General Information:
Name(s) found: SPBC887.15c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • sphingosine hydroxylase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 293 amino acids

    Gene Ontology:
    Cellular Component: endoplasmic reticulum membrane [ISSLink to PubMed article]
    integral to membrane [IEA]
    endoplasmic reticulum [IDALink to PubMed article]
    Biological Process: sphingolipid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: iron ion binding [ISS]
    sphingosine hydroxylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTTVEMLTT WNPVTVSLVS PVIIYWVASA FFGFLHYIEL PVFEKYRIHP PEEIARRNRV  60
   61 PQMAVVKAVL FQQLCEVVVG IALAMFEGYP EPIDEAKQML RYEAFFSKNL PALLQVAPFA 120
  121 PKLAYNFIVP AFQYFFAFFI IDSWQYFWHR YLHYNKKLYN MIHAHHHRLQ VPYAMGALYN 180
  181 HPFEGLILDT FGAGVAYLAA GLSPQQAVIF FTLSTLKTVD DHCGYVFPYD PLQMFFANNA 240
  241 RYHDLHHQPY GFQKNFSQPF FTFWDHVLGT YMPPKSETPY EKKQKAKNAK KVN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] MSA 2.306995 View MSA. No confident structure predictions are available.
    2 View Details [83..293] Pfam 32.30103 No description for PF04116.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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