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Protein Overview: SPBC651.09c

General Information:
Name(s) found: SPBC651.09c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • RNA polymerase II associated Paf1 complex [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 560 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Cdc73/Paf1 complex [ISSLink to PubMed article]
    Biological Process: histone methylation [ISSLink to PubMed article]
    transcription initiation [IEA]
    histone ubiquitination [ISSLink to PubMed article]
    RNA elongation from RNA polymerase II promoter [ISSLink to PubMed article]
    Molecular Function: DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADFQDELLA LAGIDDSDVA SNRKRAHDDL DDVLSSSSDE DNNENVGQDY AEESGGEGNE  60
   61 KSEDEFEEKF KNPYRLEGKF KDEADRAKIM AMTEIERESI LFEREEEISK LMERRELAIR 120
  121 LHQQNAQYMA QSTRRSTRDK PLTSAAAGKR DKLTELKKRR QERSARSVSE RTRKRSPVSD 180
  181 YEEQNESEKS EEEEGYSPSY AEEKVEQVSK DNASANLYDL NAIRLGRKHV AEYMYHPIFE 240
  241 STVTGCFVRV KIGERDGQGV YRLCQVKGIL ESRKPYRVDG VLTKVSLECF HGRSKRVFDV 300
  301 NVLSNEPFSD HDFQRWHHQM MEDKLSMPSK NFVQRKLNDL RDMSKYVLSE KEVSDIINRK 360
  361 KELSRVPSNI AAEKTRLRQR RQAAYVAGNA ELVKEIDDQL NTLEELSMGS NQNSNSAMDQ 420
  421 LAKVNERNRR RNHTEIRLAE QRMNEERRRL SAAATATPMS APTSVLTGTS PQPSPSLSTS 480
  481 IMSTPKLNPS ESVVVASEKA SSPDLSPKLL PSESQIFDEG IAVTQTPNTL EDKDFKLHEK 540
  541 AVHGIDDIIA TVDFGIDINI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] PSI-BLAST 3.69897 Heavy meromyosin subfragment
    2 View Details [214..347] PSI-BLAST 45.221849 No description for 2bzeA was found.
    3 View Details [348..560] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle