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Protein Overview: SPAC1556.05c

General Information:
Name(s) found: SPAC1556.05c [Sanger Pombe]
Description(s) found:
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  • gi|74625960|sp|Q9UTJ4.1|CGR1_SCHPO RecName: Full=rRNA-processing protein cgr1 [NCBI NR]
  • gi|6448610|emb|CAB61216.1| CGR1 family [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115234|ref|NP_594322.1| CGR1 family [Schizosaccharomyces pombe] [NCBI NR]
  • pir||T50084 hypothetical coiled-coil protein [imported] - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • CGR1 family [Sanger Pombe]
  • rRNA-processing protein cgr1 OS=Schizosaccharomyces pombe GN=cgr1 PE=2 SV=1 [Swiss-Prot]
  • POSSIBLY INVOLVED IN RIBOSOME BIOGENESIS; SIMILAR TO S. CEREVISIAE CGR1; PREDICTED COILED-COIL REGION: Q9UTJ4; [pompepVF.fasta]
  • INVOLVED IN RIBOSOME BIOGENESIS BY SIMILARITY TO S. CEREVISIAE CGR1; PREDICTED COILED-COIL REGION: Q9UTJ4; [pompepV13]
  • Hypothetical coiled-coil protein [pompep4896]
  • |||CGR1 family [pompepnew.fasta]
  • SPAC1556.05c protein [4896.FASTAC]
  • |||CGR1 family|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical coiled-coil protein [Schizosaccharomyces pombe]gi|6448610|emb|CAB61216.1| SPAC1556.05c [Schizosaccharomyces pombe]gi|11288452|pir||T50084 hypothetical coiled-coil protein [imported] - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • (Q9UTJ4) Hypothetical coiled-coil protein [pompep4896_normal_reversed]
  • SPAC1556.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC1556.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |cgr1||ribosome biogenesis CGR1 family |Schizosaccharomyces pombe|chr 1|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • rRNA-processing protein cgr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=cgr1 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 111 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    nucleolus [IDALink to PubMed article][ISSLink to PubMed article]
    Biological Process: rRNA processing [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVNGTKGVCV SGKPWKTEKK AYNRSGLADA QRTPYEKRME QKRKLDEIKE REKELKREKE  60
   61 EQRAAHAEKI RTRRQAKADR ERMELLQAKL HQKVIDRRRR REKRNKMLKE R

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] FFAS03 1.18 No description for 2j63A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle