| General Information: |
|
| Name(s) found: |
sec31 /
SPBC8D2.20c
[Sanger Pombe]
|
| Description(s) found:
Found 20 descriptions. SHOW ALL |
|
| Organism: | Schizosaccharomyces pombe |
| Length: | 1224 amino acids |
Gene Ontology: |
|
| Cellular Component: |
cytoplasm
[IDA ]
cytosol [IDA ]
COPII vesicle coat [ISS ]
|
| Biological Process: |
ER to Golgi vesicle-mediated transport
[IMP]
nuclear envelope organization [IMP ]
intracellular protein transport [IMP ]
|
| Molecular Function: |
molecular_function
[ND]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MRLKDISKTA TLAWSPRGVN DNQALLALGG YTGTEGSKNS DTLLELWNEN PESQKPVGSI 60
61 DVKTRFYDLA WEKSLDKPMG VIAGSLEDGG IGFWDPAAIL KSDEASASIA TYKSENGSIL 120
121 GPLDFNRLQP NLLASGDNKG DVWVWDIKHP QQPFALPKQN RSSEVHVVSW NNKVSHILAS 180
181 GNATEYTTVW DVKLKRQVLN LSYLGAAGVS AATGAVNSIA WHPNNATRLA TAIDDNRNPI 240
241 ILTWDLRQPT VPQNILTGHQ KAALSLSWCP EDPTFLLSSG KDGRAMVWNV ETGESLGSFP 300
301 RSGNWYTKSS WCPSNSNRVA VASLEGKVSI FSIQSTNTDK SQEASIKGAT SIDDNEFFNN 360
361 LPSIAGSQEP SFSLPLAPKW FKVPVGARFG FPNKIVSFSP NSKEVTITSA PDEVEQDEAK 420
421 SFHSSAKFQT EKEITDFCQK GVEESASEEE AINWKLLMAV SKRASRSKFA ELLGYKTLKP 480
481 KNDEDDSKVD ESVAKDSTTP NELSKNANNE NYDDDSSFYG KLAESVQEVS IADKKDAEIV 540
541 KDSFKIFNPE DSDLEKNITE ALLTGDVLSA VKACLEEKKI SEALFLSTFG GKECRKCVRD 600
601 AFYELQEHKP SYMRLSACIA DNDLQNVVDN AEVSEWKDIF VFICTYATDD EFAPLCSTLG 660
661 QRLEDLEDEK SIRSAEFCYI ASKSLQSYAN LWLKQLATST KTSKAASAYG AYVEQLTKLM 720
721 DKVSMFRSIV VYKDDELSAT KDWKLAGLYE VYIAYAKILS ASGKFDDAMS YLNLVPTEFP 780
781 GAKEEIQRLT MLLEPHAVPP IHQIKQTGYA PVQPKTSQAS SILPTVPRTT SYTSPYATTS 840
841 SHITPADVHP LPPPSTSTTA GWNDAPMLGQ LPMRRAAPSM APVRSPFPGA SSAQPAAMSR 900
901 TSSVSTLPPP PPTASMTASA PAIASPPPPK VGETYHPPTA SGTRVPPVQQ PSHPNPYTPV 960
961 APQSPVAAAS RISSSPNMPP SNPYTPIAVA SSTVNPAHTY KPHGGSQIVP PPKQPANRVV1020
1021 PLPPTASQRA SAYEPPTVSV PSPSALSPSV TPQLPPVSSR LPPVSATRPQ IPQPPPVSTA1080
1081 LPSSSAVSRP PIATSAGRSS TAASTSAPLT YPAGDRSHIP GNLRPIYEML NAELQRVSQS1140
1141 LPPQMSRVVH DTEKRLNMLF DRLNSNVLSK PLTDELLALA TSLNAHDYQT ASNIQTNIVT1200
1201 TLGDQCEHWI VGVTRLITLS KSTT |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
| # | Region(s) | Method | Confidence | Match Description | |
| 1 | View Details | [1..373] |  |
60.154902 | No description for 2pm9A was found. |
| 2 | View Details | [374..802] | |
27.69897 | No description for 2pm7A was found. |
| 3 | View Details | [803..1136] | |
5.30103 | No description for 1y0fB was found. |
| 4 | View Details | [1137..1224] | |
1.29 | Functional domain of the splicing factor Prp18 |
Functions predicted (by domain):
| # | Gene Ontology predictions | |||||||||
| 1 | No functions predicted. | |||||||||
| 2 | No functions predicted. | |||||||||
| 3 | No functions predicted. | |||||||||
| 4 |
|
| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.80 |
Source: Reynolds et al. (2008)