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Protein Overview: SPAC14C4.06c

General Information:
Name(s) found: SPAC14C4.06c [Sanger Pombe]
Description(s) found:
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  • pir||T37691 hypothetical protein SPAC14C4.06c - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626600|sp|O13713.1|NAB2_SCHPO RecName: Full=Nuclear polyadenylated RNA-binding protein nab2 [NCBI NR]
  • gi|2330679|emb|CAB11199.1| poly(A) binding protein Nab2 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19115823|ref|NP_594911.1| poly(A) binding protein Nab2 (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • poly(A) binding protein Nab2 [Sanger Pombe]
  • Nuclear polyadenylated RNA-binding protein nab2 OS=Schizosaccharomyces pombe GN=nab2 PE=2 SV=1 [Swiss-Prot]
  • HYPOTHETICAL PROTEIN; CONTAINS PFAM-B_32857; SIMILAR TO THE C-TERM OF S.C EREVISIAE NAB2- NUCLEAR POLYADENYLATED RNA-BINDING PROTEIN: O13713; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||hypothetical protein [pompepnew.fasta]
  • Zinc finger protein (Inferred); similar to S. cerevisiae YGL122C; localization nucleus (Predicted); localization cytoplasm (Predicted); involved in nucleocytoplasmic transport; involved in nuclear export (Predicted); involved in poly(A)+ mRNA-nucleus expo [4896.FASTAC]
  • |||zinc finger protein (inferred)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|7490806|pir||T37691 hypothetical protein SPAC14C4.06c - fission yeast (Schizosaccharomyces pombe)gi|2330679|emb|CAB11199.1| zinc finger protein (inferred); similar to S. cerevisiae YGL122C; localizatio [nrdb_11152004_Chlamydomonas]
  • |||zinc finger protein |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (O13713) Hypothetical protein [pompep4896_normal_reversed]
  • |||poly|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPAC14C4.06c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPAC14C4.06c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • Nuclear polyadenylated RNA-binding protein nab2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=nab2 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 307 amino acids

    Gene Ontology:
    Cellular Component: nuclear envelope [IDALink to PubMed article]
    nucleus [IDALink to PubMed article][ISSLink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    Biological Process: poly(A)+ mRNA export from nucleus [ISSLink to PubMed article]
    mRNA polyadenylation [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [IEA]
    poly(A) RNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTLLETPGY SEKLHDSIEK KLSEYGWGEE AASLADFVLV MLSNGKTQTE INEELVDLIG  60
   61 SDFDTSFSLW LFNQIEELEK SKNASVESVS KIDEIDFIEK ESTDKSQQSF SVPETSIQPQ 120
  121 SSQTPNITSL REEKELPTGR VGQKLKLTSQ KQRFNPMAAS FNYSKSVMPA AKRALTQTQE 180
  181 VPLCKYADKC SRANCIFAHP TPAAAPGEGM VLSSEMCASG KECKAADCVK GHPSPATVTT 240
  241 LPPFMSMSTI PIPCKYKPCL NPACRFIHPT KSRNMTWRPP SKTEETSLSE RSFAVNESEE 300
  301 QLHVPSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..113] FFAS03 1.12 Solution structure of PWI domain in U4/U6 small nuclear ribonucleoprotein Prp3(hPrp3)
    2 View Details [114..172] deduced N/A No confident structure predictions are available.
    3 View Details [173..307] FFAS03 1.41 No description for 2e5sA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle