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Protein Overview: SPAC20H4.05c

General Information:
Name(s) found: SPAC20H4.05c [Sanger Pombe]
Description(s) found:
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  • gi|74665866|sp|Q9HE08.1|YK95_SCHPO RecName: Full=Putative aldolase class 2 protein C20H4.05c [NCBI NR]
  • gi|19114537|ref|NP_593625.1| adducin [Schizosaccharomyces pombe] [NCBI NR]
  • gi|12038921|emb|CAC19735.1| adducin [Schizosaccharomyces pombe] [NCBI NR]
  • adducin [Sanger Pombe]
  • Putative aldolase class 2 protein C20H4.05c OS=Schizosaccharomyces pombe GN=SPAC20H4.05c PE=2 SV=1 [Swiss-Prot]
  • Methylthioribulose-1-phosphate dehydratase OS=Schizosaccharomyces pombe GN=mde1 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE PHOSPHATE EPIMERASE: Q9HE08; [pompepVF.fasta]
  • Putative phosphate epimerase [pompep4896]
  • |||putative phosphate epimerase [pompepnew.fasta]
  • SPAC20H4.05c protein [4896.FASTAC]
  • |||phosphate epimerase (predicted)|Schizosaccharomyces pombe|chr 1|||Manual [pombe041504.fasta]
  • putative phosphate epimerase [Schizosaccharomyces pombe]gi|12038921|emb|CAC19735.1| SPAC20H4.05c [Schizosaccharomyces pombe] [nrdb_11152004_Chlamydomonas]
  • |||phosphate epimerase |Schizosaccharomyces pombe|chr 1|||Manual [pompep2242005.fasta]
  • (Q9HE08) Putative phosphate epimerase [pompep4896_normal_reversed]
  • |||5'-methylthioribulose-1-phosphate dehydratase|Schizosaccharomyces pombe|chr 1|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • hypothetical protein SPAC20H4.05c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPAC20H4.05c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • |||adducin|Schizosaccharomyces pombe|chr 1|||Manual [spombe-190209-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 221 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [ISSLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: L-methionine salvage from methylthioadenosine [ISS]
    Molecular Function: zinc ion binding [IEA]
    methylthioribulose 1-phosphate dehydratase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDFLKKDLG CLRSGDLKKC GELICEICRD LYTSGWVTGT GDAIVIAPSG VQKERMELHH  60
   61 LFVMSLITRE YMRMPALRLK PSQCTPLFLA VYTSLRDAYA CIHTHSQEAI LLSTLFADSD 120
  121 HFSATGFEVL SYIPKGSKNN GFHKPTDKIK IPFINNTAHE SDLHDSLQEA INLYPDTCAV 180
  181 IVRDHGIYCW GDTWQDTKMN TEAVEFLFQA YLRRRRLQKP E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..221] PSI-BLAST 46.69897 L-ribulose-5-phosphate 4-epimerase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.89539096965643 bayes_pls_golite062009
  • catalytic activity
    		•  1.58067730905989 bayes_pls_golite062009
  • protein binding
    		•  0.401574215469404 bayes_pls_golite062009
  • lyase activity
    		•  0.114082266751758 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle