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Protein Overview: apg3

General Information:
Name(s) found: apg3 / SPBC3B9.06c [Sanger Pombe]
Description(s) found:
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  • pir||T40345 probable autophagocytosis protein - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|62899671|sp|O43035.1|ATG3_SCHPO RecName: Full=Autophagy-related protein 3; AltName: Full=Autophagy-related E2-like conjugation enzyme atg3 [NCBI NR]
  • gi|2950472|emb|CAA17786.1| autophagy associated protein Apg3 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19113456|ref|NP_596664.1| autophagy associated protein Apg3 (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • autophagy associated protein Apg3 [Sanger Pombe]
  • Autophagy-related protein 3 OS=Schizosaccharomyces pombe GN=atg3 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE AUTOPHAGY PROTEIN; SIMILAR TO S. CEREVISIAE AUT1: O43035; [pompepVF.fasta]
  • PUTATIVE AUTOPHAGY PROTEIN; BY SIMILARITY S. CEREVISIAE AUT1: O43035; [pompepV13]
  • Putative autophagocytosis protein [pompep4896]
  • |||putative autophagy protein [pompepnew.fasta]
  • SPBC3B9.06c protein [4896.FASTAC]
  • |||involved in autophagy (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • putative autophagocytosis protein [Schizosaccharomyces pombe]gi|2950472|emb|CAA17786.1| SPBC3B9.06c [Schizosaccharomyces pombe]gi|7492424|pir||T40345 probable autophagocytosis protein - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||autophagy associated protein|Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O43035) Putative autophagocytosis protein [pompep4896_normal_reversed]
  • |apg3||autophagy associated protein Apg3 |Schizosaccharomyces pombe|chr 2|||Manual [SGD_S-Pombe_na_10-23-2009_con_reversed.fasta]
  • SPBC3B9.06c [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • Autophagy-related protein 3 (Autophagy-related E2-like conjugation enzyme atg3) [nr-271106-contam.fasta]
  • hypothetical protein SPBC3B9.06c [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • |atg3|apg3|autophagy associated protein Atg3|Schizosaccharomyces pombe|chr 2|||Manual [Other_S_Pombe_12-15-2011_reversed.fasta]
  • Autophagy-related protein 3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=atg3 PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 275 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: autophagic vacuole assembly [ISS]
    autophagy [IMPLink to PubMed article]
    C-terminal protein lipidation [ISS]
    protein targeting to membrane [ISS]
    CVT pathway [ISS]
    macroautophagy [IC]
    cellular response to nitrogen starvation [IMPLink to PubMed article]
    Molecular Function: Atg8 ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQRLTSAFL NWREHITPAS KTSDFENTGM ISPEEFVLAG DYLVSKFPTW SWECGDRIRG  60
   61 FLPKDKQYLV TRHVFCVQRN INIGVNEEWV DIETDDTRNK DDDQDDDAIS SIHSDTSDIA 120
  121 SAERLKGQSK ELSDSGPLPL KDEEDDDQMV SPVIKEDEGR YYDLYIVYDK YYRTPRLFLR 180
  181 GWNAGGQLLT MKDIYEDVSG EHAGKTVTME PFPHYHSHNT MASVHPCKHA SVLLKLIKQH 240
  241 RERNDPIRVD QYMVLFLKFV STMLPYFEID YTIQA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..275] PSI-BLAST 88.221849 No description for 2dytA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle