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Protein Overview: fap1

General Information:
Name(s) found: fap1 / SPBC354.15 [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • L-pipecolate oxidase [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 412 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: L-lysine catabolic process [TASLink to PubMed article]
    Molecular Function: L-pipecolate oxidase activity [IDALink to PubMed article]
    FAD binding [IDALink to PubMed article]
    proline oxidase activity [IDALink to PubMed article]
    [NOT]fructosyl-amino acid oxidase activity [IDALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKNTSVIIV GAGVFGLSAA LELTKRGGYT IKILDRAPPP VIDGSSVDAN RIIRSDYADA  60
   61 VYCSMGIDAL EEWRTNPLFK EQFYGSGLMF VGRDNVEYRD MSLENLTKMG VSAAKFQTTE 120
  121 ELRKLFPKWI GELNDGEAGY ANFSSGWANA EQSVKSVVNY LAHAGVSFIS GPEGTVEELI 180
  181 TEENVVKGVR TTTGAYMAEK LIFATGAWTA SLLPNDHTRF LATGQPVAYI KLTPEEYIRF 240
  241 LTNPVYLDFD TGFYIFPPTP DGYLKFARHG YGFTRMQNLK SGKVESVPPK KPLVSPILPK 300
  301 EAELDLRRNL QRTYGEEISQ RPFYKTRICY YTDTADAEFV FDYHPDYENL FVCTGGSGHG 360
  361 FKFFPILGKY SIGCMFRELE EPLLKKWRWK KENLEFAALD HSRAGPSRQE LS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..412] PSI-BLAST 49.69897 Sarcosine oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  1.61125987248836 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.07245967881566 bayes_pls_golite062009
  • catalytic activity
    		•  1.03127962968326 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  0.681230241795345 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.397770205910041 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.18223312042771 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle