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Protein Overview: sap145

General Information:
Name(s) found: sap145 / SPAC22F8.10c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • U2 snRNP-associated protein Sap145 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 601 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    spliceosomal complex [IDALink to PubMed article]
    U2 snRNP [ISSLink to PubMed article]
    Biological Process: spliceosome assembly [ISSLink to PubMed article]
    Molecular Function: RNA binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLLTRPKHC CLDFLLMAEI QTAQNPLKEL EKILERNNKQ KNKKSRNQVR REKKKLLREK  60
   61 TNSGAKLAEK NSDDKDQLTE NNDNLYNDKK SNGNFYDTNK TDSVDGMVYT TIVDSVELDP 120
  121 NDPLIEQFKD VFNRFKADGQ EKDFEDTDKG QIMYSDDEIL SEGEEDALQK QQEEKLSKKK 180
  181 LRKLKRMTVA QLKMLSEKAD VVEWWDVSSL DPLFLTHLKA YPNTVPVPRH WNQKRDYLSG 240
  241 QRGIERQLFE LPSYIRATGI VQMRNAVHEN EADMPLRQKM RERVQPKMGK LDIDYQKLHD 300
  301 AFFRYQTKPV LTGFGECYFE GKELEADVKE KRPGDISEEL REALGIAPGA PPPWLFAMQR 360
  361 YGPPPSYPDL KIPGVNCPIP TGAQWGFHPG GWGKPPVDQF NRPLYGDVFG NVKPRIHAGT 420
  421 GSPVSTQHWG ELEEFEEEES SEEEESEDVE YPTEEITERE TIEEYQSASE PRSQREDLHA 480
  481 EPLTYFNQSN VEVDNVELRK NTQPSSDAAN RDLYQVLPEK STNISGFMGP QHQYDIPTAE 540
  541 DTLPQKRNAH SMLSSTNKGD VALNQSSNWQ DELSELVSEQ AMKVGAAKRQ KTQSKRDKFR 600
  601 L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] MSA 109.138997 View MSA. No confident structure predictions are available.
    2 View Details [188..384] Pfam 93.091515 No description for PF04037.2 was found. No confident structure predictions are available.
    3 View Details [385..521] deduced N/A No confident structure predictions are available.
    4 View Details [522..601] MSA 1.014989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.61

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle